RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SPRR2BP35325 72 aa7.45□□□□□ -1.22
PNKP-215ENST00000600910 SPRR2AP35326 72 aa7.45□□□□□ -1.22
PNKP-215ENST00000600910 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
PNKP-215ENST00000600910 NEBP20929 6669 aa7.42□□□□□ -1.22
PNKP-215ENST00000600910 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
PNKP-215ENST00000600910 MT1LQ93083 61 aa7.31□□□□□ -1.24
PNKP-215ENST00000600910 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
PNKP-215ENST00000600910 MT1GP13640 62 aa7.23□□□□□ -1.25
PNKP-215ENST00000600910 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
PNKP-215ENST00000600910 SPRR2DP22532 72 aa7.19□□□□□ -1.26
PNKP-215ENST00000600910 MT1MQ8N339 61 aa7.12□□□□□ -1.27
PNKP-215ENST00000600910 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
PNKP-215ENST00000600910 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
PNKP-215ENST00000600910 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
PNKP-215ENST00000600910 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
PNKP-215ENST00000600910 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.3
PNKP-215ENST00000600910 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.3
PNKP-215ENST00000600910 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.3
PNKP-215ENST00000600910 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
PNKP-215ENST00000600910 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
PNKP-215ENST00000600910 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
PNKP-215ENST00000600910 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
PNKP-215ENST00000600910 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
PNKP-215ENST00000600910 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
PNKP-215ENST00000600910 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
PNKP-215ENST00000600910 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
PNKP-215ENST00000600910 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
PNKP-215ENST00000600910 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
PNKP-215ENST00000600910 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
PNKP-215ENST00000600910 MT4P47944 62 aa6.26□□□□□ -1.41
PNKP-215ENST00000600910 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
PNKP-215ENST00000600910 MT1AP04731 61 aa6.21□□□□□ -1.41
PNKP-215ENST00000600910 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
PNKP-215ENST00000600910 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
PNKP-215ENST00000600910 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
PNKP-215ENST00000600910 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
PNKP-215ENST00000600910 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
PNKP-215ENST00000600910 H3BS24 57 aa6.07□□□□□ -1.44
PNKP-215ENST00000600910 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
PNKP-215ENST00000600910 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
PNKP-215ENST00000600910 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
PNKP-215ENST00000600910 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
PNKP-215ENST00000600910 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
PNKP-215ENST00000600910 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
PNKP-215ENST00000600910 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
PNKP-215ENST00000600910 MT3P25713 68 aa5.66□□□□□ -1.5
PNKP-215ENST00000600910 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
PNKP-215ENST00000600910 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
PNKP-215ENST00000600910 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
PNKP-215ENST00000600910 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
PNKP-215ENST00000600910 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
PNKP-215ENST00000600910 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
PNKP-215ENST00000600910 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
PNKP-215ENST00000600910 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
PNKP-215ENST00000600910 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
PNKP-215ENST00000600910 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
PNKP-215ENST00000600910 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
PNKP-215ENST00000600910 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
PNKP-215ENST00000600910 INE1O15225 51 aa4.91□□□□□ -1.62
PNKP-215ENST00000600910 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
PNKP-215ENST00000600910 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
PNKP-215ENST00000600910 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
PNKP-215ENST00000600910 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
PNKP-215ENST00000600910 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
PNKP-215ENST00000600910 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
PNKP-215ENST00000600910 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
PNKP-215ENST00000600910 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
PNKP-215ENST00000600910 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
PNKP-215ENST00000600910 PRM1P04553 51 aa4.1□□□□□ -1.75
PNKP-215ENST00000600910 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
PNKP-215ENST00000600910 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
PNKP-215ENST00000600910 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
PNKP-215ENST00000600910 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
PNKP-215ENST00000600910 PHGR1C9JFL3 82 aa3.59□□□□□ -1.84
PNKP-215ENST00000600910 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
PNKP-215ENST00000600910 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
PNKP-215ENST00000600910 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms