RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
ZNF548-210ENST00000600442 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.63
ZNF548-210ENST00000600442 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
ZNF548-210ENST00000600442 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
ZNF548-210ENST00000600442 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
ZNF548-210ENST00000600442 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
ZNF548-210ENST00000600442 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
ZNF548-210ENST00000600442 SPRR2DP22532 72 aa4.77□□□□□ -1.65
ZNF548-210ENST00000600442 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
ZNF548-210ENST00000600442 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
ZNF548-210ENST00000600442 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
ZNF548-210ENST00000600442 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
ZNF548-210ENST00000600442 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
ZNF548-210ENST00000600442 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
ZNF548-210ENST00000600442 MT1EP04732 61 aa4.62□□□□□ -1.67
ZNF548-210ENST00000600442 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
ZNF548-210ENST00000600442 MT1LQ93083 61 aa4.52□□□□□ -1.69
ZNF548-210ENST00000600442 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
ZNF548-210ENST00000600442 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
ZNF548-210ENST00000600442 MT1GP13640 62 aa4.48□□□□□ -1.69
ZNF548-210ENST00000600442 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
ZNF548-210ENST00000600442 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
ZNF548-210ENST00000600442 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
ZNF548-210ENST00000600442 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
ZNF548-210ENST00000600442 MT1MQ8N339 61 aa4.35□□□□□ -1.71
ZNF548-210ENST00000600442 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
ZNF548-210ENST00000600442 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
ZNF548-210ENST00000600442 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
ZNF548-210ENST00000600442 MT4P47944 62 aa4.22□□□□□ -1.73
ZNF548-210ENST00000600442 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
ZNF548-210ENST00000600442 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
ZNF548-210ENST00000600442 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
ZNF548-210ENST00000600442 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
ZNF548-210ENST00000600442 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
ZNF548-210ENST00000600442 H3BS24 57 aa4.12□□□□□ -1.75
ZNF548-210ENST00000600442 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
ZNF548-210ENST00000600442 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
ZNF548-210ENST00000600442 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
ZNF548-210ENST00000600442 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
ZNF548-210ENST00000600442 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
ZNF548-210ENST00000600442 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
ZNF548-210ENST00000600442 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
ZNF548-210ENST00000600442 MT1AP04731 61 aa3.88□□□□□ -1.79
ZNF548-210ENST00000600442 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
ZNF548-210ENST00000600442 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
ZNF548-210ENST00000600442 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
ZNF548-210ENST00000600442 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
ZNF548-210ENST00000600442 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
ZNF548-210ENST00000600442 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
ZNF548-210ENST00000600442 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
ZNF548-210ENST00000600442 INE1O15225 51 aa3.6□□□□□ -1.83
ZNF548-210ENST00000600442 MT3P25713 68 aa3.58□□□□□ -1.84
ZNF548-210ENST00000600442 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
ZNF548-210ENST00000600442 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
ZNF548-210ENST00000600442 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
ZNF548-210ENST00000600442 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
ZNF548-210ENST00000600442 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
ZNF548-210ENST00000600442 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
ZNF548-210ENST00000600442 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
ZNF548-210ENST00000600442 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
ZNF548-210ENST00000600442 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
ZNF548-210ENST00000600442 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
ZNF548-210ENST00000600442 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
ZNF548-210ENST00000600442 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
ZNF548-210ENST00000600442 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
ZNF548-210ENST00000600442 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
ZNF548-210ENST00000600442 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
ZNF548-210ENST00000600442 PRM1P04553 51 aa2.81□□□□□ -1.96
ZNF548-210ENST00000600442 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
ZNF548-210ENST00000600442 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
ZNF548-210ENST00000600442 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
ZNF548-210ENST00000600442 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
ZNF548-210ENST00000600442 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
ZNF548-210ENST00000600442 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
ZNF548-210ENST00000600442 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
ZNF548-210ENST00000600442 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
ZNF548-210ENST00000600442 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
ZNF548-210ENST00000600442 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 134.2 ms