RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 MDN1Q9NU22 5596 aa9.1□□□□□ -0.95
LDLRAD4-218ENST00000592991 KRTAP19-3Q7Z4W3 81 aa9.04□□□□□ -0.96
LDLRAD4-218ENST00000592991 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
LDLRAD4-218ENST00000592991 SPRR2EP22531 72 aa9□□□□□ -0.97
LDLRAD4-218ENST00000592991 SPRR2BP35325 72 aa9□□□□□ -0.97
LDLRAD4-218ENST00000592991 SPRR2AP35326 72 aa9□□□□□ -0.97
LDLRAD4-218ENST00000592991 LCE5AQ5TCM9 118 aa8.91□□□□□ -0.98
LDLRAD4-218ENST00000592991 KRTAP4-7Q9BYR0 210 aa8.9□□□□□ -0.99
LDLRAD4-218ENST00000592991 SPRR5A0A1B0GTR4 108 aa8.88□□□□□ -0.99
LDLRAD4-218ENST00000592991 MT1GP13640 62 aa8.88□□□□□ -0.99
LDLRAD4-218ENST00000592991 MT1MQ8N339 61 aa8.84□□□□□ -0.99
LDLRAD4-218ENST00000592991 LCE3CQ5T5A8 94 aa8.83□□□□□ -1
LDLRAD4-218ENST00000592991 NEBP20929 6669 aa8.79□□□□□ -1
LDLRAD4-218ENST00000592991 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
LDLRAD4-218ENST00000592991 KRTAP19-4Q3LI73 84 aa8.7□□□□□ -1.02
LDLRAD4-218ENST00000592991 SPRR2DP22532 72 aa8.66□□□□□ -1.02
LDLRAD4-218ENST00000592991 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
LDLRAD4-218ENST00000592991 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
LDLRAD4-218ENST00000592991 DSTQ03001 7570 aaKnown RBP8.56□□□□□ -1.04
LDLRAD4-218ENST00000592991 KRTAP9-6A8MVA2 160 aa8.42□□□□□ -1.06
LDLRAD4-218ENST00000592991 LOC100996750A0A140TA64 210 aa8.36□□□□□ -1.07
LDLRAD4-218ENST00000592991 LCE3BQ5TA77 95 aa8.34□□□□□ -1.07
LDLRAD4-218ENST00000592991 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
LDLRAD4-218ENST00000592991 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
LDLRAD4-218ENST00000592991 KRTAP20-1Q3LI63 56 aa8.15□□□□□ -1.1
LDLRAD4-218ENST00000592991 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
LDLRAD4-218ENST00000592991 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
LDLRAD4-218ENST00000592991 KRTAP5-5Q701N2 237 aaPredicted RBP7.98□□□□□ -1.13
LDLRAD4-218ENST00000592991 H3BS24 57 aa7.83□□□□□ -1.16
LDLRAD4-218ENST00000592991 MT1AP04731 61 aa7.74□□□□□ -1.17
LDLRAD4-218ENST00000592991 KRTAP6-1Q3LI64 71 aa7.73□□□□□ -1.17
LDLRAD4-218ENST00000592991 KRTAP5-4Q6L8H1 288 aa7.73□□□□□ -1.17
LDLRAD4-218ENST00000592991 SYNE1Q8NF91 8797 aaKnown RBP7.66□□□□□ -1.18
LDLRAD4-218ENST00000592991 LCE4AQ5TA78 99 aa7.63□□□□□ -1.19
LDLRAD4-218ENST00000592991 KRTAP4-9Q9BYQ8 210 aa7.59□□□□□ -1.19
LDLRAD4-218ENST00000592991 MT4P47944 62 aa7.58□□□□□ -1.2
LDLRAD4-218ENST00000592991 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
LDLRAD4-218ENST00000592991 KRTAP4-6Q9BYQ5 205 aa7.49□□□□□ -1.21
LDLRAD4-218ENST00000592991 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
LDLRAD4-218ENST00000592991 KRTAP12-4P60329 112 aa7.44□□□□□ -1.22
LDLRAD4-218ENST00000592991 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
LDLRAD4-218ENST00000592991 KRTAP9-4Q9BYQ2 154 aa7.37□□□□□ -1.23
LDLRAD4-218ENST00000592991 KRTAP20-2Q3LI61 65 aa7.27□□□□□ -1.25
LDLRAD4-218ENST00000592991 KRTAP6-2Q3LI66 62 aa7.16□□□□□ -1.26
LDLRAD4-218ENST00000592991 INE1O15225 51 aa7.09□□□□□ -1.28
LDLRAD4-218ENST00000592991 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
LDLRAD4-218ENST00000592991 MT3P25713 68 aa7□□□□□ -1.29
LDLRAD4-218ENST00000592991 KRTAP5-2Q701N4 177 aa6.98□□□□□ -1.29
LDLRAD4-218ENST00000592991 AHNAK2Q8IVF2 5795 aa6.71□□□□□ -1.34
LDLRAD4-218ENST00000592991 OBSCNQ5VST9 7968 aa6.57□□□□□ -1.36
LDLRAD4-218ENST00000592991 LCE3DQ9BYE3 92 aa6.56□□□□□ -1.36
LDLRAD4-218ENST00000592991 GPR98Q8WXG9 6306 aa6.51□□□□□ -1.37
LDLRAD4-218ENST00000592991 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
LDLRAD4-218ENST00000592991 LCE3EQ5T5B0 92 aa6.35□□□□□ -1.39
LDLRAD4-218ENST00000592991 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
LDLRAD4-218ENST00000592991 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
LDLRAD4-218ENST00000592991 LCE1EQ5T753 118 aa6.1□□□□□ -1.43
LDLRAD4-218ENST00000592991 KRTAP5-1Q6L8H4 278 aa6.09□□□□□ -1.43
LDLRAD4-218ENST00000592991 MUC5ACP98088 5654 aa5.95□□□□□ -1.46
LDLRAD4-218ENST00000592991 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
LDLRAD4-218ENST00000592991 LCE1BQ5T7P3 118 aa5.85□□□□□ -1.47
LDLRAD4-218ENST00000592991 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
LDLRAD4-218ENST00000592991 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
LDLRAD4-218ENST00000592991 PRM1P04553 51 aa5.61□□□□□ -1.51
LDLRAD4-218ENST00000592991 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
LDLRAD4-218ENST00000592991 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
LDLRAD4-218ENST00000592991 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
LDLRAD4-218ENST00000592991 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
LDLRAD4-218ENST00000592991 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
LDLRAD4-218ENST00000592991 KRTAP21-2Q3LI59 83 aa5.05□□□□□ -1.6
LDLRAD4-218ENST00000592991 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
LDLRAD4-218ENST00000592991 KRTAP4-4Q9BYR3 166 aa4.6□□□□□ -1.67
LDLRAD4-218ENST00000592991 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
LDLRAD4-218ENST00000592991 PHGR1C9JFL3 82 aa4.36□□□□□ -1.71
LDLRAD4-218ENST00000592991 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
LDLRAD4-218ENST00000592991 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
LDLRAD4-218ENST00000592991 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 152 ms