RNA–Protein interactions for RNA: ENST00000592224.5

SAFB-211, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 3,014 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-211ENST00000592224 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
SAFB-211ENST00000592224 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
SAFB-211ENST00000592224 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
SAFB-211ENST00000592224 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
SAFB-211ENST00000592224 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
SAFB-211ENST00000592224 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
SAFB-211ENST00000592224 MT1LQ93083 61 aa4.72□□□□□ -1.65
SAFB-211ENST00000592224 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
SAFB-211ENST00000592224 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SAFB-211ENST00000592224 MT1EP04732 61 aa4.67□□□□□ -1.66
SAFB-211ENST00000592224 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
SAFB-211ENST00000592224 MT1GP13640 62 aa4.58□□□□□ -1.68
SAFB-211ENST00000592224 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
SAFB-211ENST00000592224 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
SAFB-211ENST00000592224 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
SAFB-211ENST00000592224 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
SAFB-211ENST00000592224 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
SAFB-211ENST00000592224 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
SAFB-211ENST00000592224 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SAFB-211ENST00000592224 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
SAFB-211ENST00000592224 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
SAFB-211ENST00000592224 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
SAFB-211ENST00000592224 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
SAFB-211ENST00000592224 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
SAFB-211ENST00000592224 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
SAFB-211ENST00000592224 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
SAFB-211ENST00000592224 SPRR2EP22531 72 aa4.18□□□□□ -1.74
SAFB-211ENST00000592224 SPRR2BP35325 72 aa4.18□□□□□ -1.74
SAFB-211ENST00000592224 SPRR2AP35326 72 aa4.18□□□□□ -1.74
SAFB-211ENST00000592224 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
SAFB-211ENST00000592224 NEBP20929 6669 aa4.15□□□□□ -1.75
SAFB-211ENST00000592224 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
SAFB-211ENST00000592224 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
SAFB-211ENST00000592224 PRM1P04553 51 aa4□□□□□ -1.77
SAFB-211ENST00000592224 SPRR2DP22532 72 aa3.99□□□□□ -1.77
SAFB-211ENST00000592224 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
SAFB-211ENST00000592224 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
SAFB-211ENST00000592224 MT1AP04731 61 aa3.93□□□□□ -1.78
SAFB-211ENST00000592224 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
SAFB-211ENST00000592224 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
SAFB-211ENST00000592224 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
SAFB-211ENST00000592224 MT4P47944 62 aa3.66□□□□□ -1.82
SAFB-211ENST00000592224 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
SAFB-211ENST00000592224 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
SAFB-211ENST00000592224 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
SAFB-211ENST00000592224 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
SAFB-211ENST00000592224 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
SAFB-211ENST00000592224 MT3P25713 68 aa3.48□□□□□ -1.85
SAFB-211ENST00000592224 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
SAFB-211ENST00000592224 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
SAFB-211ENST00000592224 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
SAFB-211ENST00000592224 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
SAFB-211ENST00000592224 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SAFB-211ENST00000592224 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
SAFB-211ENST00000592224 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
SAFB-211ENST00000592224 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
SAFB-211ENST00000592224 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
SAFB-211ENST00000592224 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SAFB-211ENST00000592224 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
SAFB-211ENST00000592224 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
SAFB-211ENST00000592224 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
SAFB-211ENST00000592224 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
SAFB-211ENST00000592224 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
SAFB-211ENST00000592224 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
SAFB-211ENST00000592224 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
SAFB-211ENST00000592224 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
SAFB-211ENST00000592224 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
SAFB-211ENST00000592224 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SAFB-211ENST00000592224 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
SAFB-211ENST00000592224 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
SAFB-211ENST00000592224 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
SAFB-211ENST00000592224 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SAFB-211ENST00000592224 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
SAFB-211ENST00000592224 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SAFB-211ENST00000592224 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
SAFB-211ENST00000592224 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
SAFB-211ENST00000592224 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 101.7 ms