RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
RAVER1-204ENST00000592208 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
RAVER1-204ENST00000592208 MT1LQ93083 61 aa4.88□□□□□ -1.63
RAVER1-204ENST00000592208 MUC2Q02817 5179 aa4.84□□□□□ -1.63
RAVER1-204ENST00000592208 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.64
RAVER1-204ENST00000592208 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
RAVER1-204ENST00000592208 MT1EP04732 61 aa4.81□□□□□ -1.64
RAVER1-204ENST00000592208 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
RAVER1-204ENST00000592208 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
RAVER1-204ENST00000592208 MT1MQ8N339 61 aa4.66□□□□□ -1.66
RAVER1-204ENST00000592208 MT3P25713 68 aa4.63□□□□□ -1.67
RAVER1-204ENST00000592208 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
RAVER1-204ENST00000592208 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
RAVER1-204ENST00000592208 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
RAVER1-204ENST00000592208 MT4P47944 62 aa4.52□□□□□ -1.69
RAVER1-204ENST00000592208 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
RAVER1-204ENST00000592208 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
RAVER1-204ENST00000592208 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
RAVER1-204ENST00000592208 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
RAVER1-204ENST00000592208 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
RAVER1-204ENST00000592208 MT1AP04731 61 aa4.39□□□□□ -1.71
RAVER1-204ENST00000592208 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
RAVER1-204ENST00000592208 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
RAVER1-204ENST00000592208 USH2AO75445 5202 aa4.29□□□□□ -1.72
RAVER1-204ENST00000592208 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
RAVER1-204ENST00000592208 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
RAVER1-204ENST00000592208 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
RAVER1-204ENST00000592208 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
RAVER1-204ENST00000592208 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
RAVER1-204ENST00000592208 PRM1P04553 51 aa4.21□□□□□ -1.73
RAVER1-204ENST00000592208 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
RAVER1-204ENST00000592208 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
RAVER1-204ENST00000592208 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
RAVER1-204ENST00000592208 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
RAVER1-204ENST00000592208 KMT2DO14686 5537 aa4.15□□□□□ -1.75
RAVER1-204ENST00000592208 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
RAVER1-204ENST00000592208 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
RAVER1-204ENST00000592208 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.76
RAVER1-204ENST00000592208 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
RAVER1-204ENST00000592208 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
RAVER1-204ENST00000592208 KRTAP5-9P26371 169 aa4□□□□□ -1.77
RAVER1-204ENST00000592208 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
RAVER1-204ENST00000592208 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
RAVER1-204ENST00000592208 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
RAVER1-204ENST00000592208 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
RAVER1-204ENST00000592208 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
RAVER1-204ENST00000592208 NEBP20929 6669 aa3.83□□□□□ -1.8
RAVER1-204ENST00000592208 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
RAVER1-204ENST00000592208 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
RAVER1-204ENST00000592208 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
RAVER1-204ENST00000592208 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
RAVER1-204ENST00000592208 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
RAVER1-204ENST00000592208 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
RAVER1-204ENST00000592208 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
RAVER1-204ENST00000592208 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
RAVER1-204ENST00000592208 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
RAVER1-204ENST00000592208 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
RAVER1-204ENST00000592208 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
RAVER1-204ENST00000592208 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
RAVER1-204ENST00000592208 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
RAVER1-204ENST00000592208 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
RAVER1-204ENST00000592208 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
RAVER1-204ENST00000592208 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
RAVER1-204ENST00000592208 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
RAVER1-204ENST00000592208 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
RAVER1-204ENST00000592208 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
RAVER1-204ENST00000592208 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
RAVER1-204ENST00000592208 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
RAVER1-204ENST00000592208 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
RAVER1-204ENST00000592208 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
RAVER1-204ENST00000592208 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
RAVER1-204ENST00000592208 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
RAVER1-204ENST00000592208 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
RAVER1-204ENST00000592208 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
RAVER1-204ENST00000592208 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
RAVER1-204ENST00000592208 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
RAVER1-204ENST00000592208 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
RAVER1-204ENST00000592208 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms