RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
MBD3-209ENST00000592012 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
MBD3-209ENST00000592012 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
MBD3-209ENST00000592012 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
MBD3-209ENST00000592012 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
MBD3-209ENST00000592012 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
MBD3-209ENST00000592012 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
MBD3-209ENST00000592012 MT1GP13640 62 aa6.57□□□□□ -1.36
MBD3-209ENST00000592012 MT1MQ8N339 61 aa6.54□□□□□ -1.36
MBD3-209ENST00000592012 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
MBD3-209ENST00000592012 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
MBD3-209ENST00000592012 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
MBD3-209ENST00000592012 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
MBD3-209ENST00000592012 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
MBD3-209ENST00000592012 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
MBD3-209ENST00000592012 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
MBD3-209ENST00000592012 INE1O15225 51 aa6.42□□□□□ -1.38
MBD3-209ENST00000592012 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
MBD3-209ENST00000592012 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
MBD3-209ENST00000592012 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
MBD3-209ENST00000592012 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
MBD3-209ENST00000592012 MDN1Q9NU22 5596 aa6.27□□□□□ -1.41
MBD3-209ENST00000592012 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
MBD3-209ENST00000592012 SPRR2EP22531 72 aa6.1□□□□□ -1.43
MBD3-209ENST00000592012 SPRR2BP35325 72 aa6.1□□□□□ -1.43
MBD3-209ENST00000592012 SPRR2AP35326 72 aa6.1□□□□□ -1.43
MBD3-209ENST00000592012 NEBP20929 6669 aa5.99□□□□□ -1.45
MBD3-209ENST00000592012 SPRR2DP22532 72 aa5.88□□□□□ -1.47
MBD3-209ENST00000592012 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
MBD3-209ENST00000592012 KRTAP5-5Q701N2 237 aaPredicted RBP5.86□□□□□ -1.47
MBD3-209ENST00000592012 MT1AP04731 61 aa5.84□□□□□ -1.48
MBD3-209ENST00000592012 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
MBD3-209ENST00000592012 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
MBD3-209ENST00000592012 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
MBD3-209ENST00000592012 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
MBD3-209ENST00000592012 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
MBD3-209ENST00000592012 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
MBD3-209ENST00000592012 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
MBD3-209ENST00000592012 LCE3DQ9BYE3 92 aa5.43□□□□□ -1.54
MBD3-209ENST00000592012 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
MBD3-209ENST00000592012 KRTAP5-4Q6L8H1 288 aa5.33□□□□□ -1.56
MBD3-209ENST00000592012 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
MBD3-209ENST00000592012 MT3P25713 68 aa5.26□□□□□ -1.57
MBD3-209ENST00000592012 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
MBD3-209ENST00000592012 MT4P47944 62 aa5.15□□□□□ -1.58
MBD3-209ENST00000592012 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
MBD3-209ENST00000592012 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
MBD3-209ENST00000592012 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
MBD3-209ENST00000592012 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
MBD3-209ENST00000592012 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
MBD3-209ENST00000592012 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
MBD3-209ENST00000592012 PRM1P04553 51 aa4.91□□□□□ -1.62
MBD3-209ENST00000592012 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
MBD3-209ENST00000592012 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
MBD3-209ENST00000592012 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
MBD3-209ENST00000592012 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
MBD3-209ENST00000592012 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
MBD3-209ENST00000592012 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
MBD3-209ENST00000592012 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
MBD3-209ENST00000592012 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
MBD3-209ENST00000592012 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
MBD3-209ENST00000592012 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
MBD3-209ENST00000592012 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
MBD3-209ENST00000592012 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
MBD3-209ENST00000592012 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
MBD3-209ENST00000592012 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
MBD3-209ENST00000592012 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
MBD3-209ENST00000592012 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
MBD3-209ENST00000592012 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
MBD3-209ENST00000592012 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
MBD3-209ENST00000592012 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
MBD3-209ENST00000592012 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
MBD3-209ENST00000592012 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
MBD3-209ENST00000592012 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
MBD3-209ENST00000592012 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
MBD3-209ENST00000592012 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
MBD3-209ENST00000592012 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
MBD3-209ENST00000592012 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 125.5 ms