RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 SPRR2BP35325 72 aa6.42□□□□□ -1.38
AP3D1-211ENST00000591650 SPRR2AP35326 72 aa6.42□□□□□ -1.38
AP3D1-211ENST00000591650 LCE1AQ5T7P2 110 aa6.42□□□□□ -1.38
AP3D1-211ENST00000591650 MT1EP04732 61 aa6.4□□□□□ -1.39
AP3D1-211ENST00000591650 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
AP3D1-211ENST00000591650 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
AP3D1-211ENST00000591650 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
AP3D1-211ENST00000591650 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
AP3D1-211ENST00000591650 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
AP3D1-211ENST00000591650 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
AP3D1-211ENST00000591650 SPRR2DP22532 72 aa6.2□□□□□ -1.42
AP3D1-211ENST00000591650 MT1LQ93083 61 aa6.19□□□□□ -1.42
AP3D1-211ENST00000591650 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
AP3D1-211ENST00000591650 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
AP3D1-211ENST00000591650 MT1GP13640 62 aa6.09□□□□□ -1.43
AP3D1-211ENST00000591650 MT1MQ8N339 61 aa6.06□□□□□ -1.44
AP3D1-211ENST00000591650 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
AP3D1-211ENST00000591650 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
AP3D1-211ENST00000591650 LCE3BQ5TA77 95 aa6□□□□□ -1.45
AP3D1-211ENST00000591650 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
AP3D1-211ENST00000591650 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
AP3D1-211ENST00000591650 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
AP3D1-211ENST00000591650 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
AP3D1-211ENST00000591650 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
AP3D1-211ENST00000591650 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
AP3D1-211ENST00000591650 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
AP3D1-211ENST00000591650 NDUFAF8A1L188 74 aa5.65□□□□□ -1.51
AP3D1-211ENST00000591650 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
AP3D1-211ENST00000591650 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
AP3D1-211ENST00000591650 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
AP3D1-211ENST00000591650 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
AP3D1-211ENST00000591650 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
AP3D1-211ENST00000591650 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
AP3D1-211ENST00000591650 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
AP3D1-211ENST00000591650 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
AP3D1-211ENST00000591650 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
AP3D1-211ENST00000591650 MT4P47944 62 aa5.41□□□□□ -1.54
AP3D1-211ENST00000591650 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
AP3D1-211ENST00000591650 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
AP3D1-211ENST00000591650 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
AP3D1-211ENST00000591650 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
AP3D1-211ENST00000591650 MT1AP04731 61 aa5.26□□□□□ -1.57
AP3D1-211ENST00000591650 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
AP3D1-211ENST00000591650 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
AP3D1-211ENST00000591650 KRTAP5-10Q6L8G5 202 aa5.18□□□□□ -1.58
AP3D1-211ENST00000591650 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
AP3D1-211ENST00000591650 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
AP3D1-211ENST00000591650 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
AP3D1-211ENST00000591650 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
AP3D1-211ENST00000591650 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
AP3D1-211ENST00000591650 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
AP3D1-211ENST00000591650 MT3P25713 68 aa4.76□□□□□ -1.65
AP3D1-211ENST00000591650 INE1O15225 51 aa4.74□□□□□ -1.65
AP3D1-211ENST00000591650 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
AP3D1-211ENST00000591650 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
AP3D1-211ENST00000591650 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
AP3D1-211ENST00000591650 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
AP3D1-211ENST00000591650 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
AP3D1-211ENST00000591650 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
AP3D1-211ENST00000591650 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
AP3D1-211ENST00000591650 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
AP3D1-211ENST00000591650 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
AP3D1-211ENST00000591650 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
AP3D1-211ENST00000591650 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
AP3D1-211ENST00000591650 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
AP3D1-211ENST00000591650 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
AP3D1-211ENST00000591650 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
AP3D1-211ENST00000591650 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
AP3D1-211ENST00000591650 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
AP3D1-211ENST00000591650 LCE1FQ5T754 118 aa3.59□□□□□ -1.84
AP3D1-211ENST00000591650 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
AP3D1-211ENST00000591650 PRM1P04553 51 aa3.52□□□□□ -1.85
AP3D1-211ENST00000591650 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
AP3D1-211ENST00000591650 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
AP3D1-211ENST00000591650 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
AP3D1-211ENST00000591650 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
AP3D1-211ENST00000591650 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
AP3D1-211ENST00000591650 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 154.8 ms