RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 MUC2Q02817 5179 aa5.28□□□□□ -1.56
MBD1-224ENST00000591416 MT1LQ93083 61 aa5.27□□□□□ -1.57
MBD1-224ENST00000591416 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
MBD1-224ENST00000591416 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.58
MBD1-224ENST00000591416 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
MBD1-224ENST00000591416 MT1MQ8N339 61 aa5.09□□□□□ -1.6
MBD1-224ENST00000591416 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
MBD1-224ENST00000591416 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
MBD1-224ENST00000591416 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
MBD1-224ENST00000591416 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
MBD1-224ENST00000591416 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
MBD1-224ENST00000591416 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
MBD1-224ENST00000591416 USH2AO75445 5202 aa4.82□□□□□ -1.64
MBD1-224ENST00000591416 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
MBD1-224ENST00000591416 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
MBD1-224ENST00000591416 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
MBD1-224ENST00000591416 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
MBD1-224ENST00000591416 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
MBD1-224ENST00000591416 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
MBD1-224ENST00000591416 MT3P25713 68 aa4.71□□□□□ -1.65
MBD1-224ENST00000591416 MT4P47944 62 aa4.71□□□□□ -1.66
MBD1-224ENST00000591416 MT1AP04731 61 aa4.67□□□□□ -1.66
MBD1-224ENST00000591416 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
MBD1-224ENST00000591416 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.67
MBD1-224ENST00000591416 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
MBD1-224ENST00000591416 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
MBD1-224ENST00000591416 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
MBD1-224ENST00000591416 KRTAP2-3P0C7H8 128 aa4.51□□□□□ -1.69
MBD1-224ENST00000591416 KRTAP2-4Q9BYR9 128 aa4.51□□□□□ -1.69
MBD1-224ENST00000591416 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
MBD1-224ENST00000591416 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
MBD1-224ENST00000591416 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
MBD1-224ENST00000591416 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
MBD1-224ENST00000591416 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
MBD1-224ENST00000591416 KMT2DO14686 5537 aa4.4□□□□□ -1.7
MBD1-224ENST00000591416 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
MBD1-224ENST00000591416 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
MBD1-224ENST00000591416 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
MBD1-224ENST00000591416 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
MBD1-224ENST00000591416 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
MBD1-224ENST00000591416 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
MBD1-224ENST00000591416 PRM1P04553 51 aa4.31□□□□□ -1.72
MBD1-224ENST00000591416 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
MBD1-224ENST00000591416 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
MBD1-224ENST00000591416 NEBP20929 6669 aa4.08□□□□□ -1.76
MBD1-224ENST00000591416 MDN1Q9NU22 5596 aa4□□□□□ -1.77
MBD1-224ENST00000591416 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
MBD1-224ENST00000591416 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
MBD1-224ENST00000591416 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
MBD1-224ENST00000591416 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
MBD1-224ENST00000591416 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
MBD1-224ENST00000591416 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
MBD1-224ENST00000591416 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
MBD1-224ENST00000591416 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
MBD1-224ENST00000591416 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
MBD1-224ENST00000591416 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
MBD1-224ENST00000591416 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
MBD1-224ENST00000591416 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
MBD1-224ENST00000591416 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
MBD1-224ENST00000591416 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
MBD1-224ENST00000591416 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
MBD1-224ENST00000591416 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
MBD1-224ENST00000591416 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
MBD1-224ENST00000591416 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
MBD1-224ENST00000591416 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
MBD1-224ENST00000591416 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
MBD1-224ENST00000591416 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
MBD1-224ENST00000591416 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
MBD1-224ENST00000591416 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
MBD1-224ENST00000591416 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
MBD1-224ENST00000591416 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
MBD1-224ENST00000591416 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
MBD1-224ENST00000591416 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
MBD1-224ENST00000591416 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
MBD1-224ENST00000591416 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
MBD1-224ENST00000591416 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
MBD1-224ENST00000591416 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms