RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
GCDH-214ENST00000591043 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
GCDH-214ENST00000591043 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
GCDH-214ENST00000591043 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
GCDH-214ENST00000591043 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
GCDH-214ENST00000591043 MT1EP04732 61 aa7.25□□□□□ -1.25
GCDH-214ENST00000591043 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
GCDH-214ENST00000591043 KMT2DO14686 5537 aa7.23□□□□□ -1.25
GCDH-214ENST00000591043 MT1LQ93083 61 aa7.18□□□□□ -1.26
GCDH-214ENST00000591043 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
GCDH-214ENST00000591043 INE1O15225 51 aa7□□□□□ -1.29
GCDH-214ENST00000591043 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
GCDH-214ENST00000591043 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
GCDH-214ENST00000591043 MT1GP13640 62 aa6.91□□□□□ -1.3
GCDH-214ENST00000591043 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
GCDH-214ENST00000591043 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
GCDH-214ENST00000591043 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.31
GCDH-214ENST00000591043 SPRR2EP22531 72 aa6.85□□□□□ -1.31
GCDH-214ENST00000591043 SPRR2BP35325 72 aa6.85□□□□□ -1.31
GCDH-214ENST00000591043 SPRR2AP35326 72 aa6.85□□□□□ -1.31
GCDH-214ENST00000591043 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
GCDH-214ENST00000591043 MT1MQ8N339 61 aa6.8□□□□□ -1.32
GCDH-214ENST00000591043 KRTAP2-2Q9BYT5 123 aa6.72□□□□□ -1.33
GCDH-214ENST00000591043 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
GCDH-214ENST00000591043 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
GCDH-214ENST00000591043 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
GCDH-214ENST00000591043 SPRR2DP22532 72 aa6.62□□□□□ -1.35
GCDH-214ENST00000591043 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
GCDH-214ENST00000591043 GPR98Q8WXG9 6306 aa6.58□□□□□ -1.36
GCDH-214ENST00000591043 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
GCDH-214ENST00000591043 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
GCDH-214ENST00000591043 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
GCDH-214ENST00000591043 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
GCDH-214ENST00000591043 MT1AP04731 61 aa6.13□□□□□ -1.43
GCDH-214ENST00000591043 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
GCDH-214ENST00000591043 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
GCDH-214ENST00000591043 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
GCDH-214ENST00000591043 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
GCDH-214ENST00000591043 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.47
GCDH-214ENST00000591043 MT4P47944 62 aa5.88□□□□□ -1.47
GCDH-214ENST00000591043 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
GCDH-214ENST00000591043 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
GCDH-214ENST00000591043 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
GCDH-214ENST00000591043 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
GCDH-214ENST00000591043 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
GCDH-214ENST00000591043 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
GCDH-214ENST00000591043 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
GCDH-214ENST00000591043 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
GCDH-214ENST00000591043 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
GCDH-214ENST00000591043 MT3P25713 68 aa5.55□□□□□ -1.52
GCDH-214ENST00000591043 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
GCDH-214ENST00000591043 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
GCDH-214ENST00000591043 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
GCDH-214ENST00000591043 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.56
GCDH-214ENST00000591043 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
GCDH-214ENST00000591043 PRM1P04553 51 aa5.06□□□□□ -1.6
GCDH-214ENST00000591043 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
GCDH-214ENST00000591043 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
GCDH-214ENST00000591043 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
GCDH-214ENST00000591043 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
GCDH-214ENST00000591043 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
GCDH-214ENST00000591043 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
GCDH-214ENST00000591043 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
GCDH-214ENST00000591043 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
GCDH-214ENST00000591043 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
GCDH-214ENST00000591043 LCE1CQ5T751 118 aa4.4□□□□□ -1.7
GCDH-214ENST00000591043 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.7
GCDH-214ENST00000591043 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
GCDH-214ENST00000591043 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
GCDH-214ENST00000591043 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
GCDH-214ENST00000591043 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
GCDH-214ENST00000591043 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
GCDH-214ENST00000591043 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
GCDH-214ENST00000591043 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
GCDH-214ENST00000591043 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
GCDH-214ENST00000591043 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
GCDH-214ENST00000591043 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
GCDH-214ENST00000591043 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 109.5 ms