RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 MACF1Q9UPN3 7388 aaKnown RBP9□□□□□ -0.97
RUNDC3A-206ENST00000590941 KRTAP19-3Q7Z4W3 81 aa8.94□□□□□ -0.98
RUNDC3A-206ENST00000590941 MT1GP13640 62 aa8.92□□□□□ -0.98
RUNDC3A-206ENST00000590941 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
RUNDC3A-206ENST00000590941 SPRR2FQ96RM1 72 aa8.88□□□□□ -0.99
RUNDC3A-206ENST00000590941 KRTAP4-7Q9BYR0 210 aa8.86□□□□□ -0.99
RUNDC3A-206ENST00000590941 A0A0A0MQY5 61 aa8.78□□□□□ -1
RUNDC3A-206ENST00000590941 MT1MQ8N339 61 aa8.78□□□□□ -1
RUNDC3A-206ENST00000590941 KRTAP9-6A8MVA2 160 aa8.76□□□□□ -1.01
RUNDC3A-206ENST00000590941 LCE5AQ5TCM9 118 aa8.71□□□□□ -1.02
RUNDC3A-206ENST00000590941 KRTAP5-9P26371 169 aa8.69□□□□□ -1.02
RUNDC3A-206ENST00000590941 KRTAP6-3Q3LI67 103 aa8.65□□□□□ -1.03
RUNDC3A-206ENST00000590941 MUC12Q9UKN1 5478 aa8.51□□□□□ -1.05
RUNDC3A-206ENST00000590941 KRTAP4-3Q9BYR4 195 aa8.51□□□□□ -1.05
RUNDC3A-206ENST00000590941 NEBP20929 6669 aa8.47□□□□□ -1.05
RUNDC3A-206ENST00000590941 LCE1AQ5T7P2 110 aa8.43□□□□□ -1.06
RUNDC3A-206ENST00000590941 KRTAP2-3P0C7H8 128 aa8.38□□□□□ -1.07
RUNDC3A-206ENST00000590941 KRTAP2-4Q9BYR9 128 aa8.38□□□□□ -1.07
RUNDC3A-206ENST00000590941 KRTAP2-1Q9BYU5 128 aa8.38□□□□□ -1.07
RUNDC3A-206ENST00000590941 SPRR2EP22531 72 aa8.34□□□□□ -1.08
RUNDC3A-206ENST00000590941 SPRR2BP35325 72 aa8.34□□□□□ -1.08
RUNDC3A-206ENST00000590941 SPRR2AP35326 72 aa8.34□□□□□ -1.08
RUNDC3A-206ENST00000590941 KRTAP20-1Q3LI63 56 aa8.33□□□□□ -1.08
RUNDC3A-206ENST00000590941 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
RUNDC3A-206ENST00000590941 MDN1Q9NU22 5596 aa8.3□□□□□ -1.08
RUNDC3A-206ENST00000590941 INE1O15225 51 aa8.17□□□□□ -1.1
RUNDC3A-206ENST00000590941 SPRR2DP22532 72 aa8.04□□□□□ -1.12
RUNDC3A-206ENST00000590941 MT1AP04731 61 aa7.88□□□□□ -1.15
RUNDC3A-206ENST00000590941 KRTAP5-5Q701N2 237 aaPredicted RBP7.87□□□□□ -1.15
RUNDC3A-206ENST00000590941 DSTQ03001 7570 aaKnown RBP7.86□□□□□ -1.15
RUNDC3A-206ENST00000590941 KRTAP6-1Q3LI64 71 aa7.72□□□□□ -1.17
RUNDC3A-206ENST00000590941 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
RUNDC3A-206ENST00000590941 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
RUNDC3A-206ENST00000590941 GPR98Q8WXG9 6306 aa7.52□□□□□ -1.21
RUNDC3A-206ENST00000590941 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
RUNDC3A-206ENST00000590941 KRTAP5-4Q6L8H1 288 aa7.35□□□□□ -1.23
RUNDC3A-206ENST00000590941 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
RUNDC3A-206ENST00000590941 SYNE1Q8NF91 8797 aaKnown RBP7.26□□□□□ -1.25
RUNDC3A-206ENST00000590941 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
RUNDC3A-206ENST00000590941 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.27
RUNDC3A-206ENST00000590941 MT3P25713 68 aa7.14□□□□□ -1.27
RUNDC3A-206ENST00000590941 LCE3DQ9BYE3 92 aa7.11□□□□□ -1.27
RUNDC3A-206ENST00000590941 KRTAP6-2Q3LI66 62 aa7.06□□□□□ -1.28
RUNDC3A-206ENST00000590941 LCE3EQ5T5B0 92 aa6.98□□□□□ -1.29
RUNDC3A-206ENST00000590941 MT4P47944 62 aa6.9□□□□□ -1.31
RUNDC3A-206ENST00000590941 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
RUNDC3A-206ENST00000590941 KRTAP20-2Q3LI61 65 aa6.84□□□□□ -1.31
RUNDC3A-206ENST00000590941 LCE1DQ5T752 114 aa6.84□□□□□ -1.32
RUNDC3A-206ENST00000590941 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
RUNDC3A-206ENST00000590941 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
RUNDC3A-206ENST00000590941 AHNAK2Q8IVF2 5795 aa6.62□□□□□ -1.35
RUNDC3A-206ENST00000590941 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
RUNDC3A-206ENST00000590941 KRTAP5-10Q6L8G5 202 aa6.54□□□□□ -1.36
RUNDC3A-206ENST00000590941 KRTAP5-7Q6L8G8 165 aa6.39□□□□□ -1.39
RUNDC3A-206ENST00000590941 OBSCNQ5VST9 7968 aa6.29□□□□□ -1.4
RUNDC3A-206ENST00000590941 PRM1P04553 51 aa6.21□□□□□ -1.42
RUNDC3A-206ENST00000590941 LCE1EQ5T753 118 aa6.13□□□□□ -1.43
RUNDC3A-206ENST00000590941 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
RUNDC3A-206ENST00000590941 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
RUNDC3A-206ENST00000590941 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
RUNDC3A-206ENST00000590941 LCE1CQ5T751 118 aa5.69□□□□□ -1.5
RUNDC3A-206ENST00000590941 LCE1BQ5T7P3 118 aa5.69□□□□□ -1.5
RUNDC3A-206ENST00000590941 KRTAP5-8O75690 187 aa5.62□□□□□ -1.51
RUNDC3A-206ENST00000590941 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
RUNDC3A-206ENST00000590941 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
RUNDC3A-206ENST00000590941 MUC5BQ9HC84 5762 aaPredicted RBP5.56□□□□□ -1.52
RUNDC3A-206ENST00000590941 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
RUNDC3A-206ENST00000590941 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
RUNDC3A-206ENST00000590941 KRTAP21-2Q3LI59 83 aa5.05□□□□□ -1.6
RUNDC3A-206ENST00000590941 KRTAP5-11Q6L8G4 156 aa5□□□□□ -1.61
RUNDC3A-206ENST00000590941 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
RUNDC3A-206ENST00000590941 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
RUNDC3A-206ENST00000590941 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
RUNDC3A-206ENST00000590941 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
RUNDC3A-206ENST00000590941 KRTAP21-1Q3LI58 79 aa3.9□□□□□ -1.79
RUNDC3A-206ENST00000590941 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
RUNDC3A-206ENST00000590941 MUC16Q8WXI7 14507 aa2.78□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms