RNA–Protein interactions for RNA: ENST00000590602.5

TMC6-216, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMC6, Length 5,268 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-216ENST00000590602 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
TMC6-216ENST00000590602 MT3P25713 68 aa5□□□□□ -1.61
TMC6-216ENST00000590602 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
TMC6-216ENST00000590602 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
TMC6-216ENST00000590602 MT1MQ8N339 61 aa4.9□□□□□ -1.63
TMC6-216ENST00000590602 PRM1P04553 51 aa4.9□□□□□ -1.63
TMC6-216ENST00000590602 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
TMC6-216ENST00000590602 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
TMC6-216ENST00000590602 MT4P47944 62 aa4.87□□□□□ -1.63
TMC6-216ENST00000590602 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
TMC6-216ENST00000590602 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
TMC6-216ENST00000590602 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
TMC6-216ENST00000590602 MUC2Q02817 5179 aa4.76□□□□□ -1.65
TMC6-216ENST00000590602 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
TMC6-216ENST00000590602 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
TMC6-216ENST00000590602 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
TMC6-216ENST00000590602 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
TMC6-216ENST00000590602 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
TMC6-216ENST00000590602 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
TMC6-216ENST00000590602 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
TMC6-216ENST00000590602 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
TMC6-216ENST00000590602 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
TMC6-216ENST00000590602 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
TMC6-216ENST00000590602 MT1AP04731 61 aa4.56□□□□□ -1.68
TMC6-216ENST00000590602 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
TMC6-216ENST00000590602 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
TMC6-216ENST00000590602 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
TMC6-216ENST00000590602 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
TMC6-216ENST00000590602 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
TMC6-216ENST00000590602 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
TMC6-216ENST00000590602 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
TMC6-216ENST00000590602 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
TMC6-216ENST00000590602 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
TMC6-216ENST00000590602 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
TMC6-216ENST00000590602 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
TMC6-216ENST00000590602 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
TMC6-216ENST00000590602 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TMC6-216ENST00000590602 USH2AO75445 5202 aa4.25□□□□□ -1.73
TMC6-216ENST00000590602 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
TMC6-216ENST00000590602 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
TMC6-216ENST00000590602 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
TMC6-216ENST00000590602 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
TMC6-216ENST00000590602 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
TMC6-216ENST00000590602 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
TMC6-216ENST00000590602 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
TMC6-216ENST00000590602 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
TMC6-216ENST00000590602 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
TMC6-216ENST00000590602 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
TMC6-216ENST00000590602 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
TMC6-216ENST00000590602 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
TMC6-216ENST00000590602 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
TMC6-216ENST00000590602 NEBP20929 6669 aa3.57□□□□□ -1.84
TMC6-216ENST00000590602 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
TMC6-216ENST00000590602 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
TMC6-216ENST00000590602 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
TMC6-216ENST00000590602 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
TMC6-216ENST00000590602 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
TMC6-216ENST00000590602 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TMC6-216ENST00000590602 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
TMC6-216ENST00000590602 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
TMC6-216ENST00000590602 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
TMC6-216ENST00000590602 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
TMC6-216ENST00000590602 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
TMC6-216ENST00000590602 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
TMC6-216ENST00000590602 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
TMC6-216ENST00000590602 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
TMC6-216ENST00000590602 KRTAP5-8O75690 187 aa2.56□□□□□ -2
TMC6-216ENST00000590602 PHGR1C9JFL3 82 aa2.55□□□□□ -2
TMC6-216ENST00000590602 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
TMC6-216ENST00000590602 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
TMC6-216ENST00000590602 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
TMC6-216ENST00000590602 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
TMC6-216ENST00000590602 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
TMC6-216ENST00000590602 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
TMC6-216ENST00000590602 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
TMC6-216ENST00000590602 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
TMC6-216ENST00000590602 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 88 ms