RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 SPRR2BP35325 72 aa3.62□□□□□ -1.83
VPS25-205ENST00000590339 SPRR2AP35326 72 aa3.62□□□□□ -1.83
VPS25-205ENST00000590339 KRTAP4-8Q9BYQ9 185 aa3.62□□□□□ -1.83
VPS25-205ENST00000590339 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
VPS25-205ENST00000590339 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
VPS25-205ENST00000590339 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
VPS25-205ENST00000590339 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
VPS25-205ENST00000590339 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
VPS25-205ENST00000590339 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
VPS25-205ENST00000590339 SPRR2DP22532 72 aa3.49□□□□□ -1.85
VPS25-205ENST00000590339 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
VPS25-205ENST00000590339 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
VPS25-205ENST00000590339 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
VPS25-205ENST00000590339 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
VPS25-205ENST00000590339 MT1EP04732 61 aa3.4□□□□□ -1.87
VPS25-205ENST00000590339 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
VPS25-205ENST00000590339 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
VPS25-205ENST00000590339 MT1LQ93083 61 aa3.34□□□□□ -1.87
VPS25-205ENST00000590339 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
VPS25-205ENST00000590339 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
VPS25-205ENST00000590339 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
VPS25-205ENST00000590339 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
VPS25-205ENST00000590339 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
VPS25-205ENST00000590339 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
VPS25-205ENST00000590339 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
VPS25-205ENST00000590339 MT1GP13640 62 aa3.2□□□□□ -1.9
VPS25-205ENST00000590339 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
VPS25-205ENST00000590339 MT1MQ8N339 61 aa3.19□□□□□ -1.9
VPS25-205ENST00000590339 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
VPS25-205ENST00000590339 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
VPS25-205ENST00000590339 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
VPS25-205ENST00000590339 MT4P47944 62 aa3.09□□□□□ -1.91
VPS25-205ENST00000590339 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
VPS25-205ENST00000590339 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
VPS25-205ENST00000590339 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
VPS25-205ENST00000590339 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
VPS25-205ENST00000590339 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
VPS25-205ENST00000590339 H3BS24 57 aa3.03□□□□□ -1.92
VPS25-205ENST00000590339 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
VPS25-205ENST00000590339 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
VPS25-205ENST00000590339 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
VPS25-205ENST00000590339 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
VPS25-205ENST00000590339 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
VPS25-205ENST00000590339 MT1AP04731 61 aa2.85□□□□□ -1.95
VPS25-205ENST00000590339 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
VPS25-205ENST00000590339 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
VPS25-205ENST00000590339 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
VPS25-205ENST00000590339 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
VPS25-205ENST00000590339 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
VPS25-205ENST00000590339 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
VPS25-205ENST00000590339 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
VPS25-205ENST00000590339 INE1O15225 51 aa2.75□□□□□ -1.97
VPS25-205ENST00000590339 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
VPS25-205ENST00000590339 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
VPS25-205ENST00000590339 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
VPS25-205ENST00000590339 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
VPS25-205ENST00000590339 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
VPS25-205ENST00000590339 MT3P25713 68 aa2.54□□□□□ -2
VPS25-205ENST00000590339 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
VPS25-205ENST00000590339 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
VPS25-205ENST00000590339 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
VPS25-205ENST00000590339 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
VPS25-205ENST00000590339 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
VPS25-205ENST00000590339 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
VPS25-205ENST00000590339 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
VPS25-205ENST00000590339 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
VPS25-205ENST00000590339 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
VPS25-205ENST00000590339 PRM1P04553 51 aa2.17□□□□□ -2.06
VPS25-205ENST00000590339 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
VPS25-205ENST00000590339 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
VPS25-205ENST00000590339 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
VPS25-205ENST00000590339 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
VPS25-205ENST00000590339 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
VPS25-205ENST00000590339 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
VPS25-205ENST00000590339 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
VPS25-205ENST00000590339 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
VPS25-205ENST00000590339 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
VPS25-205ENST00000590339 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms