RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 R4GN34 69 aa4.37□□□□□ -1.71
GRN-216ENST00000589923 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
GRN-216ENST00000589923 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
GRN-216ENST00000589923 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
GRN-216ENST00000589923 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
GRN-216ENST00000589923 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
GRN-216ENST00000589923 H3BS24 57 aa4.27□□□□□ -1.73
GRN-216ENST00000589923 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
GRN-216ENST00000589923 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
GRN-216ENST00000589923 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
GRN-216ENST00000589923 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
GRN-216ENST00000589923 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
GRN-216ENST00000589923 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
GRN-216ENST00000589923 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
GRN-216ENST00000589923 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
GRN-216ENST00000589923 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
GRN-216ENST00000589923 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
GRN-216ENST00000589923 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
GRN-216ENST00000589923 MT1EP04732 61 aa4.08□□□□□ -1.76
GRN-216ENST00000589923 TNP1P09430 55 aa4.08□□□□□ -1.76
GRN-216ENST00000589923 MT4P47944 62 aa4.07□□□□□ -1.76
GRN-216ENST00000589923 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
GRN-216ENST00000589923 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
GRN-216ENST00000589923 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
GRN-216ENST00000589923 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
GRN-216ENST00000589923 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
GRN-216ENST00000589923 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
GRN-216ENST00000589923 MT1GP13640 62 aa3.92□□□□□ -1.78
GRN-216ENST00000589923 MT1MQ8N339 61 aa3.91□□□□□ -1.78
GRN-216ENST00000589923 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
GRN-216ENST00000589923 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
GRN-216ENST00000589923 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
GRN-216ENST00000589923 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
GRN-216ENST00000589923 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
GRN-216ENST00000589923 MT1LQ93083 61 aa3.84□□□□□ -1.79
GRN-216ENST00000589923 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
GRN-216ENST00000589923 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
GRN-216ENST00000589923 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
GRN-216ENST00000589923 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
GRN-216ENST00000589923 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
GRN-216ENST00000589923 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
GRN-216ENST00000589923 INE1O15225 51 aa3.59□□□□□ -1.83
GRN-216ENST00000589923 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
GRN-216ENST00000589923 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
GRN-216ENST00000589923 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
GRN-216ENST00000589923 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
GRN-216ENST00000589923 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
GRN-216ENST00000589923 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
GRN-216ENST00000589923 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
GRN-216ENST00000589923 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
GRN-216ENST00000589923 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
GRN-216ENST00000589923 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
GRN-216ENST00000589923 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
GRN-216ENST00000589923 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
GRN-216ENST00000589923 MT1AP04731 61 aa3.23□□□□□ -1.89
GRN-216ENST00000589923 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
GRN-216ENST00000589923 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
GRN-216ENST00000589923 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
GRN-216ENST00000589923 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
GRN-216ENST00000589923 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
GRN-216ENST00000589923 MT3P25713 68 aa2.93□□□□□ -1.94
GRN-216ENST00000589923 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
GRN-216ENST00000589923 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
GRN-216ENST00000589923 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
GRN-216ENST00000589923 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
GRN-216ENST00000589923 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
GRN-216ENST00000589923 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
GRN-216ENST00000589923 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
GRN-216ENST00000589923 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
GRN-216ENST00000589923 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
GRN-216ENST00000589923 PRM1P04553 51 aa2.37□□□□□ -2.03
GRN-216ENST00000589923 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
GRN-216ENST00000589923 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
GRN-216ENST00000589923 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
GRN-216ENST00000589923 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
GRN-216ENST00000589923 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
GRN-216ENST00000589923 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
GRN-216ENST00000589923 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 96.3 ms