RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 SPRR2AP35326 72 aa3.84□□□□□ -1.79
APOC1-205ENST00000589781 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
APOC1-205ENST00000589781 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
APOC1-205ENST00000589781 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
APOC1-205ENST00000589781 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
APOC1-205ENST00000589781 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
APOC1-205ENST00000589781 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
APOC1-205ENST00000589781 MT1EP04732 61 aa3.7□□□□□ -1.82
APOC1-205ENST00000589781 SPRR2DP22532 72 aa3.7□□□□□ -1.82
APOC1-205ENST00000589781 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
APOC1-205ENST00000589781 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
APOC1-205ENST00000589781 MT1LQ93083 61 aa3.63□□□□□ -1.83
APOC1-205ENST00000589781 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
APOC1-205ENST00000589781 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
APOC1-205ENST00000589781 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
APOC1-205ENST00000589781 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
APOC1-205ENST00000589781 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
APOC1-205ENST00000589781 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
APOC1-205ENST00000589781 MT1MQ8N339 61 aa3.49□□□□□ -1.85
APOC1-205ENST00000589781 MT1GP13640 62 aa3.47□□□□□ -1.85
APOC1-205ENST00000589781 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
APOC1-205ENST00000589781 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
APOC1-205ENST00000589781 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
APOC1-205ENST00000589781 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
APOC1-205ENST00000589781 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
APOC1-205ENST00000589781 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
APOC1-205ENST00000589781 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
APOC1-205ENST00000589781 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
APOC1-205ENST00000589781 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
APOC1-205ENST00000589781 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
APOC1-205ENST00000589781 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
APOC1-205ENST00000589781 MT4P47944 62 aa3.26□□□□□ -1.89
APOC1-205ENST00000589781 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
APOC1-205ENST00000589781 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
APOC1-205ENST00000589781 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
APOC1-205ENST00000589781 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
APOC1-205ENST00000589781 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
APOC1-205ENST00000589781 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
APOC1-205ENST00000589781 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
APOC1-205ENST00000589781 MT1AP04731 61 aa3.08□□□□□ -1.92
APOC1-205ENST00000589781 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
APOC1-205ENST00000589781 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
APOC1-205ENST00000589781 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
APOC1-205ENST00000589781 H3BS24 57 aa2.98□□□□□ -1.93
APOC1-205ENST00000589781 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
APOC1-205ENST00000589781 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
APOC1-205ENST00000589781 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
APOC1-205ENST00000589781 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
APOC1-205ENST00000589781 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
APOC1-205ENST00000589781 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
APOC1-205ENST00000589781 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
APOC1-205ENST00000589781 MT3P25713 68 aa2.76□□□□□ -1.97
APOC1-205ENST00000589781 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
APOC1-205ENST00000589781 INE1O15225 51 aa2.73□□□□□ -1.97
APOC1-205ENST00000589781 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
APOC1-205ENST00000589781 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
APOC1-205ENST00000589781 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
APOC1-205ENST00000589781 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
APOC1-205ENST00000589781 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
APOC1-205ENST00000589781 MUC5ACP98088 5654 aa2.55□□□□□ -2
APOC1-205ENST00000589781 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
APOC1-205ENST00000589781 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
APOC1-205ENST00000589781 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
APOC1-205ENST00000589781 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
APOC1-205ENST00000589781 PRM1P04553 51 aa2.3□□□□□ -2.04
APOC1-205ENST00000589781 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
APOC1-205ENST00000589781 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
APOC1-205ENST00000589781 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
APOC1-205ENST00000589781 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
APOC1-205ENST00000589781 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
APOC1-205ENST00000589781 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
APOC1-205ENST00000589781 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
APOC1-205ENST00000589781 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
APOC1-205ENST00000589781 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
APOC1-205ENST00000589781 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
APOC1-205ENST00000589781 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
APOC1-205ENST00000589781 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms