RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 LCE2BO14633 110 aa4.68□□□□□ -1.66
SMARCA4-214ENST00000589677 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
SMARCA4-214ENST00000589677 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
SMARCA4-214ENST00000589677 MT1EP04732 61 aa4.61□□□□□ -1.67
SMARCA4-214ENST00000589677 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
SMARCA4-214ENST00000589677 PRM1P04553 51 aa4.57□□□□□ -1.68
SMARCA4-214ENST00000589677 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
SMARCA4-214ENST00000589677 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
SMARCA4-214ENST00000589677 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
SMARCA4-214ENST00000589677 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
SMARCA4-214ENST00000589677 MT1MQ8N339 61 aa4.44□□□□□ -1.7
SMARCA4-214ENST00000589677 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
SMARCA4-214ENST00000589677 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.7
SMARCA4-214ENST00000589677 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
SMARCA4-214ENST00000589677 MT3P25713 68 aa4.36□□□□□ -1.71
SMARCA4-214ENST00000589677 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SMARCA4-214ENST00000589677 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
SMARCA4-214ENST00000589677 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
SMARCA4-214ENST00000589677 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
SMARCA4-214ENST00000589677 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
SMARCA4-214ENST00000589677 USH2AO75445 5202 aa4.23□□□□□ -1.73
SMARCA4-214ENST00000589677 MT1AP04731 61 aa4.21□□□□□ -1.74
SMARCA4-214ENST00000589677 MT4P47944 62 aa4.17□□□□□ -1.74
SMARCA4-214ENST00000589677 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
SMARCA4-214ENST00000589677 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
SMARCA4-214ENST00000589677 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
SMARCA4-214ENST00000589677 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SMARCA4-214ENST00000589677 KMT2DO14686 5537 aa4.07□□□□□ -1.76
SMARCA4-214ENST00000589677 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
SMARCA4-214ENST00000589677 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
SMARCA4-214ENST00000589677 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SMARCA4-214ENST00000589677 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
SMARCA4-214ENST00000589677 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
SMARCA4-214ENST00000589677 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
SMARCA4-214ENST00000589677 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
SMARCA4-214ENST00000589677 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
SMARCA4-214ENST00000589677 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
SMARCA4-214ENST00000589677 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
SMARCA4-214ENST00000589677 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
SMARCA4-214ENST00000589677 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
SMARCA4-214ENST00000589677 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
SMARCA4-214ENST00000589677 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
SMARCA4-214ENST00000589677 NEBP20929 6669 aa3.65□□□□□ -1.83
SMARCA4-214ENST00000589677 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
SMARCA4-214ENST00000589677 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
SMARCA4-214ENST00000589677 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
SMARCA4-214ENST00000589677 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SMARCA4-214ENST00000589677 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
SMARCA4-214ENST00000589677 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
SMARCA4-214ENST00000589677 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
SMARCA4-214ENST00000589677 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SMARCA4-214ENST00000589677 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SMARCA4-214ENST00000589677 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SMARCA4-214ENST00000589677 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
SMARCA4-214ENST00000589677 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
SMARCA4-214ENST00000589677 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
SMARCA4-214ENST00000589677 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SMARCA4-214ENST00000589677 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
SMARCA4-214ENST00000589677 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
SMARCA4-214ENST00000589677 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SMARCA4-214ENST00000589677 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
SMARCA4-214ENST00000589677 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
SMARCA4-214ENST00000589677 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
SMARCA4-214ENST00000589677 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
SMARCA4-214ENST00000589677 MUC5ACP98088 5654 aa2.57□□□□□ -2
SMARCA4-214ENST00000589677 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SMARCA4-214ENST00000589677 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
SMARCA4-214ENST00000589677 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
SMARCA4-214ENST00000589677 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
SMARCA4-214ENST00000589677 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SMARCA4-214ENST00000589677 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SMARCA4-214ENST00000589677 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
SMARCA4-214ENST00000589677 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
SMARCA4-214ENST00000589677 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
SMARCA4-214ENST00000589677 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
SMARCA4-214ENST00000589677 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
SMARCA4-214ENST00000589677 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 101.7 ms