RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
R3HDM4-204ENST00000589428 KRTAP19-7Q3SYF9 63 aa7.91□□□□□ -1.14
R3HDM4-204ENST00000589428 KRTAP19-5Q3LI72 72 aa7.89□□□□□ -1.15
R3HDM4-204ENST00000589428 MT1EP04732 61 aa7.83□□□□□ -1.16
R3HDM4-204ENST00000589428 KRTAP20-1Q3LI63 56 aa7.83□□□□□ -1.16
R3HDM4-204ENST00000589428 SPRR2DP22532 72 aa7.8□□□□□ -1.16
R3HDM4-204ENST00000589428 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
R3HDM4-204ENST00000589428 KRTAP2-3P0C7H8 128 aa7.72□□□□□ -1.17
R3HDM4-204ENST00000589428 KRTAP2-4Q9BYR9 128 aa7.72□□□□□ -1.17
R3HDM4-204ENST00000589428 KRTAP19-3Q7Z4W3 81 aa7.69□□□□□ -1.18
R3HDM4-204ENST00000589428 LCE5AQ5TCM9 118 aa7.64□□□□□ -1.19
R3HDM4-204ENST00000589428 MT1GP13640 62 aa7.56□□□□□ -1.2
R3HDM4-204ENST00000589428 MT1LQ93083 61 aa7.55□□□□□ -1.2
R3HDM4-204ENST00000589428 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
R3HDM4-204ENST00000589428 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
R3HDM4-204ENST00000589428 KRTAP2-2Q9BYT5 123 aa7.49□□□□□ -1.21
R3HDM4-204ENST00000589428 KRTAP2-1Q9BYU5 128 aa7.49□□□□□ -1.21
R3HDM4-204ENST00000589428 MT1MQ8N339 61 aa7.44□□□□□ -1.22
R3HDM4-204ENST00000589428 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
R3HDM4-204ENST00000589428 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
R3HDM4-204ENST00000589428 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
R3HDM4-204ENST00000589428 LCE3CQ5T5A8 94 aa7.25□□□□□ -1.25
R3HDM4-204ENST00000589428 KRTAP4-3Q9BYR4 195 aa7.22□□□□□ -1.25
R3HDM4-204ENST00000589428 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
R3HDM4-204ENST00000589428 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
R3HDM4-204ENST00000589428 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
R3HDM4-204ENST00000589428 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
R3HDM4-204ENST00000589428 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
R3HDM4-204ENST00000589428 KRTAP5-4Q6L8H1 288 aa6.82□□□□□ -1.32
R3HDM4-204ENST00000589428 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
R3HDM4-204ENST00000589428 MT4P47944 62 aa6.78□□□□□ -1.32
R3HDM4-204ENST00000589428 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
R3HDM4-204ENST00000589428 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
R3HDM4-204ENST00000589428 H3BS24 57 aa6.72□□□□□ -1.33
R3HDM4-204ENST00000589428 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
R3HDM4-204ENST00000589428 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.34
R3HDM4-204ENST00000589428 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
R3HDM4-204ENST00000589428 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
R3HDM4-204ENST00000589428 MT1AP04731 61 aa6.45□□□□□ -1.38
R3HDM4-204ENST00000589428 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
R3HDM4-204ENST00000589428 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
R3HDM4-204ENST00000589428 KRTAP6-1Q3LI64 71 aa6.37□□□□□ -1.39
R3HDM4-204ENST00000589428 GPR98Q8WXG9 6306 aa6.25□□□□□ -1.41
R3HDM4-204ENST00000589428 AHNAK2Q8IVF2 5795 aa6.25□□□□□ -1.41
R3HDM4-204ENST00000589428 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
R3HDM4-204ENST00000589428 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
R3HDM4-204ENST00000589428 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
R3HDM4-204ENST00000589428 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
R3HDM4-204ENST00000589428 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
R3HDM4-204ENST00000589428 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
R3HDM4-204ENST00000589428 MT3P25713 68 aa5.88□□□□□ -1.47
R3HDM4-204ENST00000589428 KRTAP5-7Q6L8G8 165 aa5.78□□□□□ -1.48
R3HDM4-204ENST00000589428 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
R3HDM4-204ENST00000589428 KRTAP5-8O75690 187 aa5.56□□□□□ -1.52
R3HDM4-204ENST00000589428 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
R3HDM4-204ENST00000589428 INE1O15225 51 aa5.51□□□□□ -1.53
R3HDM4-204ENST00000589428 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
R3HDM4-204ENST00000589428 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
R3HDM4-204ENST00000589428 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
R3HDM4-204ENST00000589428 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
R3HDM4-204ENST00000589428 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
R3HDM4-204ENST00000589428 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
R3HDM4-204ENST00000589428 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
R3HDM4-204ENST00000589428 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
R3HDM4-204ENST00000589428 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
R3HDM4-204ENST00000589428 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
R3HDM4-204ENST00000589428 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
R3HDM4-204ENST00000589428 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
R3HDM4-204ENST00000589428 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
R3HDM4-204ENST00000589428 PRM1P04553 51 aa4.43□□□□□ -1.7
R3HDM4-204ENST00000589428 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
R3HDM4-204ENST00000589428 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
R3HDM4-204ENST00000589428 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
R3HDM4-204ENST00000589428 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
R3HDM4-204ENST00000589428 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
R3HDM4-204ENST00000589428 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
R3HDM4-204ENST00000589428 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
R3HDM4-204ENST00000589428 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms