RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 RPS27P42677 84 aaKnown RBP-1.46□□□□□ -2.64
SMAD4-207ENST00000589076 MINOS1Q5TGZ0 78 aa-1.46□□□□□ -2.64
SMAD4-207ENST00000589076 RPS27LQ71UM5 84 aaKnown RBP-1.46□□□□□ -2.64
SMAD4-207ENST00000589076 DEFB4AO15263 64 aa-1.48□□□□□ -2.65
SMAD4-207ENST00000589076 IGLV5-48A0A075B6I7 105 aa-1.49□□□□□ -2.65
SMAD4-207ENST00000589076 MMP24-AS1A0A0U1RRL7 71 aa-1.49□□□□□ -2.65
SMAD4-207ENST00000589076 H3BVH4 76 aa-1.51□□□□□ -2.65
SMAD4-207ENST00000589076 TNP1P09430 55 aa-1.51□□□□□ -2.65
SMAD4-207ENST00000589076 DEFB114Q30KQ6 69 aa-1.52□□□□□ -2.65
SMAD4-207ENST00000589076 H3BUA1 57 aa-1.53□□□□□ -2.65
SMAD4-207ENST00000589076 CLPSL2Q6UWE3 100 aa-1.53□□□□□ -2.65
SMAD4-207ENST00000589076 C6orf48Q9UBA6 75 aa-1.54□□□□□ -2.66
SMAD4-207ENST00000589076 NOP10Q9NPE3 64 aaKnown RBP-1.56□□□□□ -2.66
SMAD4-207ENST00000589076 FCER1GP30273 86 aa-1.58□□□□□ -2.66
SMAD4-207ENST00000589076 NCBP2-AS2Q69YL0 99 aa-1.58□□□□□ -2.66
SMAD4-207ENST00000589076 SFTA3P0C7M3 94 aa-1.59□□□□□ -2.66
SMAD4-207ENST00000589076 ATXN8Q156A1 80 aa-1.6□□□□□ -2.67
SMAD4-207ENST00000589076 DEFB108AA8MXU0 73 aa-1.64□□□□□ -2.67
SMAD4-207ENST00000589076 HILPDAQ9Y5L2 63 aa-1.68□□□□□ -2.68
SMAD4-207ENST00000589076 GNG13Q9P2W3 67 aa-1.7□□□□□ -2.68
SMAD4-207ENST00000589076 M0QY20 66 aa-1.72□□□□□ -2.68
SMAD4-207ENST00000589076 H3BSH0 61 aa-1.73□□□□□ -2.69
SMAD4-207ENST00000589076 K7EMI3 77 aa-1.77□□□□□ -2.69
SMAD4-207ENST00000589076 M0QZ58 72 aa-1.77□□□□□ -2.69
SMAD4-207ENST00000589076 A8MTW9 85 aa-1.81□□□□□ -2.7
SMAD4-207ENST00000589076 LINC01549A6NIU2 74 aa-1.82□□□□□ -2.7
SMAD4-207ENST00000589076 SMCO4Q9NRQ5 59 aa-1.82□□□□□ -2.7
SMAD4-207ENST00000589076 ABRACLQ9P1F3 81 aa-1.82□□□□□ -2.7
SMAD4-207ENST00000589076 PDCD5O14737 125 aa-1.84□□□□□ -2.7
SMAD4-207ENST00000589076 DEFB136Q30KP8 78 aa-1.84□□□□□ -2.7
SMAD4-207ENST00000589076 LINC01546A6NGU7 62 aa-1.85□□□□□ -2.71
SMAD4-207ENST00000589076 SPART-AS1P0CW21 52 aa-1.87□□□□□ -2.71
SMAD4-207ENST00000589076 KAAG1Q9UBP8 84 aa-1.87□□□□□ -2.71
SMAD4-207ENST00000589076 M0R1W7 72 aa-1.88□□□□□ -2.71
SMAD4-207ENST00000589076 DEFB108BQ8NET1 73 aa-1.88□□□□□ -2.71
SMAD4-207ENST00000589076 TMEM167BQ9NRX6 74 aa-1.88□□□□□ -2.71
SMAD4-207ENST00000589076 SERF2P84101 59 aa-1.89□□□□□ -2.71
SMAD4-207ENST00000589076 LINC00308Q8TCZ7 52 aa-1.94□□□□□ -2.72
SMAD4-207ENST00000589076 NMES1Q9C002 83 aa-1.94□□□□□ -2.72
SMAD4-207ENST00000589076 SMIM27A0A1W2PRY6 76 aa-1.96□□□□□ -2.72
SMAD4-207ENST00000589076 CD52P31358 61 aa-1.96□□□□□ -2.72
SMAD4-207ENST00000589076 DEFB133Q30KQ1 61 aa-1.99□□□□□ -2.73
SMAD4-207ENST00000589076 IGIPA6NJ69 53 aa-2□□□□□ -2.73
SMAD4-207ENST00000589076 WFDC10BQ8IUB3 73 aa-2□□□□□ -2.73
SMAD4-207ENST00000589076 GCC2Q8IWJ2 1684 aa-2.02□□□□□ -2.73
SMAD4-207ENST00000589076 Q9Y3F1 56 aa-2.02□□□□□ -2.73
SMAD4-207ENST00000589076 HTN3P15516 51 aa-2.04□□□□□ -2.74
SMAD4-207ENST00000589076 H3BUX3 64 aa-2.09□□□□□ -2.74
SMAD4-207ENST00000589076 LINC01556Q5JQF7 62 aa-2.09□□□□□ -2.74
SMAD4-207ENST00000589076 A0A087WWC5 75 aa-2.1□□□□□ -2.75
SMAD4-207ENST00000589076 H0YGX0 51 aa-2.1□□□□□ -2.75
SMAD4-207ENST00000589076 S100ZQ8WXG8 99 aa-2.12□□□□□ -2.75
SMAD4-207ENST00000589076 COX14Q96I36 57 aa-2.15□□□□□ -2.75
SMAD4-207ENST00000589076 DEFB131AP59861 70 aa-2.16□□□□□ -2.76
SMAD4-207ENST00000589076 LEAP2Q969E1 77 aa-2.18□□□□□ -2.76
SMAD4-207ENST00000589076 POLR2KP53803 58 aaKnown RBP-2.19□□□□□ -2.76
SMAD4-207ENST00000589076 PLNP26678 52 aa-2.27□□□□□ -2.77
SMAD4-207ENST00000589076 A0A096LNI7 61 aa-2.31□□□□□ -2.78
SMAD4-207ENST00000589076 A0A096LPF7 62 aa-2.32□□□□□ -2.78
SMAD4-207ENST00000589076 APELAP0DMC3 54 aa-2.33□□□□□ -2.78
SMAD4-207ENST00000589076 HTN1P15515 57 aa-2.37□□□□□ -2.79
SMAD4-207ENST00000589076 SMIM2Q9BVW6 85 aa-2.39□□□□□ -2.79
SMAD4-207ENST00000589076 CMC2Q9NRP2 79 aa-2.5□□□□□ -2.81
SMAD4-207ENST00000589076 SMIM31A0A1B0GVY4 71 aa-2.53□□□□□ -2.81
SMAD4-207ENST00000589076 NDUFA1O15239 70 aa-2.62□□□□□ -2.83
SMAD4-207ENST00000589076 RHPN1-AS1Q9BWJ2 59 aa-2.64□□□□□ -2.83
SMAD4-207ENST00000589076 TOMM7Q9P0U1 55 aa-2.77□□□□□ -2.85
SMAD4-207ENST00000589076 LINC01590Q5TEZ4 76 aa-2.89□□□□□ -2.87
SMAD4-207ENST00000589076 SNRPGP15A8MWD9 76 aa-2.94□□□□□ -2.88
SMAD4-207ENST00000589076 TMEM167AQ8TBQ9 72 aa-2.94□□□□□ -2.88
SMAD4-207ENST00000589076 PRCDQ00LT1 54 aa-3□□□□□ -2.89
SMAD4-207ENST00000589076 RPL39P62891 51 aaKnown RBP-3.1□□□□□ -2.91
SMAD4-207ENST00000589076 TOMM5Q8N4H5 51 aa-3.25□□□□□ -2.93
SMAD4-207ENST00000589076 RPL39LQ96EH5 51 aaKnown RBP-3.25□□□□□ -2.93
SMAD4-207ENST00000589076 K7EIM0 57 aa-3.37□□□□□ -2.95
SMAD4-207ENST00000589076 RPL39P5Q59GN2 51 aa-3.48□□□□□ -2.97
SMAD4-207ENST00000589076 ARHGAP5-AS1Q96IT6 56 aa-3.56□□□□□ -2.98
SMAD4-207ENST00000589076 SNRPGP62308 76 aaKnown RBP-3.76□□□□□ -3.01
Retrieved 78 of 20,778 RNA–protein pairs in 170.4 ms