RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
SMAD4-206ENST00000588860 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SMAD4-206ENST00000588860 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
SMAD4-206ENST00000588860 NEBP20929 6669 aa3.76□□□□□ -1.81
SMAD4-206ENST00000588860 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
SMAD4-206ENST00000588860 MT1BP07438 61 aa3.69□□□□□ -1.82
SMAD4-206ENST00000588860 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
SMAD4-206ENST00000588860 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
SMAD4-206ENST00000588860 TNP1P09430 55 aa3.65□□□□□ -1.83
SMAD4-206ENST00000588860 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
SMAD4-206ENST00000588860 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
SMAD4-206ENST00000588860 MT1XP80297 61 aa3.6□□□□□ -1.83
SMAD4-206ENST00000588860 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
SMAD4-206ENST00000588860 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
SMAD4-206ENST00000588860 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
SMAD4-206ENST00000588860 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
SMAD4-206ENST00000588860 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
SMAD4-206ENST00000588860 KMT2DO14686 5537 aa3.55□□□□□ -1.84
SMAD4-206ENST00000588860 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
SMAD4-206ENST00000588860 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
SMAD4-206ENST00000588860 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
SMAD4-206ENST00000588860 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
SMAD4-206ENST00000588860 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
SMAD4-206ENST00000588860 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
SMAD4-206ENST00000588860 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SMAD4-206ENST00000588860 MT3P25713 68 aa3.43□□□□□ -1.86
SMAD4-206ENST00000588860 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
SMAD4-206ENST00000588860 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
SMAD4-206ENST00000588860 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
SMAD4-206ENST00000588860 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
SMAD4-206ENST00000588860 SPRR2EP22531 72 aa3.27□□□□□ -1.89
SMAD4-206ENST00000588860 SPRR2BP35325 72 aa3.27□□□□□ -1.89
SMAD4-206ENST00000588860 SPRR2AP35326 72 aa3.27□□□□□ -1.89
SMAD4-206ENST00000588860 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
SMAD4-206ENST00000588860 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
SMAD4-206ENST00000588860 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
SMAD4-206ENST00000588860 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
SMAD4-206ENST00000588860 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
SMAD4-206ENST00000588860 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SMAD4-206ENST00000588860 SPRR2DP22532 72 aa3.17□□□□□ -1.9
SMAD4-206ENST00000588860 MT1EP04732 61 aa3.16□□□□□ -1.9
SMAD4-206ENST00000588860 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
SMAD4-206ENST00000588860 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
SMAD4-206ENST00000588860 MT1LQ93083 61 aa3.11□□□□□ -1.91
SMAD4-206ENST00000588860 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
SMAD4-206ENST00000588860 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
SMAD4-206ENST00000588860 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
SMAD4-206ENST00000588860 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
SMAD4-206ENST00000588860 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
SMAD4-206ENST00000588860 MT1GP13640 62 aa2.97□□□□□ -1.93
SMAD4-206ENST00000588860 MT1MQ8N339 61 aa2.97□□□□□ -1.93
SMAD4-206ENST00000588860 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
SMAD4-206ENST00000588860 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
SMAD4-206ENST00000588860 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
SMAD4-206ENST00000588860 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
SMAD4-206ENST00000588860 MT4P47944 62 aa2.83□□□□□ -1.96
SMAD4-206ENST00000588860 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
SMAD4-206ENST00000588860 MT1AP04731 61 aa2.64□□□□□ -1.99
SMAD4-206ENST00000588860 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-206ENST00000588860 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
SMAD4-206ENST00000588860 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
SMAD4-206ENST00000588860 INE1O15225 51 aa2.61□□□□□ -1.99
SMAD4-206ENST00000588860 MUC5ACP98088 5654 aa2.56□□□□□ -2
SMAD4-206ENST00000588860 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
SMAD4-206ENST00000588860 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
SMAD4-206ENST00000588860 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SMAD4-206ENST00000588860 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
SMAD4-206ENST00000588860 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SMAD4-206ENST00000588860 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SMAD4-206ENST00000588860 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
SMAD4-206ENST00000588860 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
SMAD4-206ENST00000588860 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
SMAD4-206ENST00000588860 PRM1P04553 51 aa2.08□□□□□ -2.08
SMAD4-206ENST00000588860 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SMAD4-206ENST00000588860 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SMAD4-206ENST00000588860 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
SMAD4-206ENST00000588860 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
SMAD4-206ENST00000588860 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms