RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
SMAD4-205ENST00000588745 MT1EP04732 61 aa4.15□□□□□ -1.74
SMAD4-205ENST00000588745 LCE1DQ5T752 114 aa4.15□□□□□ -1.74
SMAD4-205ENST00000588745 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
SMAD4-205ENST00000588745 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
SMAD4-205ENST00000588745 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
SMAD4-205ENST00000588745 MT1LQ93083 61 aa4.07□□□□□ -1.76
SMAD4-205ENST00000588745 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
SMAD4-205ENST00000588745 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
SMAD4-205ENST00000588745 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
SMAD4-205ENST00000588745 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SMAD4-205ENST00000588745 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
SMAD4-205ENST00000588745 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
SMAD4-205ENST00000588745 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
SMAD4-205ENST00000588745 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
SMAD4-205ENST00000588745 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
SMAD4-205ENST00000588745 MT1GP13640 62 aa3.95□□□□□ -1.78
SMAD4-205ENST00000588745 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SMAD4-205ENST00000588745 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
SMAD4-205ENST00000588745 MT1MQ8N339 61 aa3.91□□□□□ -1.78
SMAD4-205ENST00000588745 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.78
SMAD4-205ENST00000588745 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
SMAD4-205ENST00000588745 SPRR2EP22531 72 aa3.89□□□□□ -1.79
SMAD4-205ENST00000588745 SPRR2BP35325 72 aa3.89□□□□□ -1.79
SMAD4-205ENST00000588745 SPRR2AP35326 72 aa3.89□□□□□ -1.79
SMAD4-205ENST00000588745 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
SMAD4-205ENST00000588745 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
SMAD4-205ENST00000588745 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
SMAD4-205ENST00000588745 NEBP20929 6669 aa3.8□□□□□ -1.8
SMAD4-205ENST00000588745 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
SMAD4-205ENST00000588745 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
SMAD4-205ENST00000588745 SPRR2DP22532 72 aa3.74□□□□□ -1.81
SMAD4-205ENST00000588745 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
SMAD4-205ENST00000588745 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
SMAD4-205ENST00000588745 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-205ENST00000588745 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
SMAD4-205ENST00000588745 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
SMAD4-205ENST00000588745 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
SMAD4-205ENST00000588745 MT1AP04731 61 aa3.47□□□□□ -1.85
SMAD4-205ENST00000588745 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
SMAD4-205ENST00000588745 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
SMAD4-205ENST00000588745 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.86
SMAD4-205ENST00000588745 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SMAD4-205ENST00000588745 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
SMAD4-205ENST00000588745 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
SMAD4-205ENST00000588745 MT4P47944 62 aa3.24□□□□□ -1.89
SMAD4-205ENST00000588745 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
SMAD4-205ENST00000588745 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
SMAD4-205ENST00000588745 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SMAD4-205ENST00000588745 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.9
SMAD4-205ENST00000588745 MT3P25713 68 aa3.12□□□□□ -1.91
SMAD4-205ENST00000588745 INE1O15225 51 aa3.09□□□□□ -1.92
SMAD4-205ENST00000588745 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
SMAD4-205ENST00000588745 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SMAD4-205ENST00000588745 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
SMAD4-205ENST00000588745 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SMAD4-205ENST00000588745 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
SMAD4-205ENST00000588745 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
SMAD4-205ENST00000588745 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
SMAD4-205ENST00000588745 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
SMAD4-205ENST00000588745 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SMAD4-205ENST00000588745 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
SMAD4-205ENST00000588745 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
SMAD4-205ENST00000588745 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
SMAD4-205ENST00000588745 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
SMAD4-205ENST00000588745 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SMAD4-205ENST00000588745 PRM1P04553 51 aa2.54□□□□□ -2
SMAD4-205ENST00000588745 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
SMAD4-205ENST00000588745 LCE1CQ5T751 118 aa2.53□□□□□ -2
SMAD4-205ENST00000588745 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
SMAD4-205ENST00000588745 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
SMAD4-205ENST00000588745 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SMAD4-205ENST00000588745 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
SMAD4-205ENST00000588745 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
SMAD4-205ENST00000588745 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SMAD4-205ENST00000588745 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
SMAD4-205ENST00000588745 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 173.3 ms