RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	MT1F	P04733	61 aa		5.91	□□□□□ -1.46
NEDD4L-223	ENST00000588516	KRTAP10-10	P60014	251 aa		5.91	□□□□□ -1.46
NEDD4L-223	ENST00000588516	KRTAP19-6	Q3LI70	58 aa		5.91	□□□□□ -1.46
NEDD4L-223	ENST00000588516	KRTAP19-8	Q3LI54	63 aa		5.84	□□□□□ -1.47
NEDD4L-223	ENST00000588516	SPRR5	A0A1B0GTR4	108 aa		5.79	□□□□□ -1.48
NEDD4L-223	ENST00000588516		A0A0A0MQY5	61 aa		5.78	□□□□□ -1.48
NEDD4L-223	ENST00000588516	MUC12	Q9UKN1	5478 aa		5.75	□□□□□ -1.49
NEDD4L-223	ENST00000588516	LCE3A	Q5TA76	89 aa		5.68	□□□□□ -1.5
NEDD4L-223	ENST00000588516	KRTAP8-1	Q8IUC2	63 aa		5.68	□□□□□ -1.5
NEDD4L-223	ENST00000588516	PRO2289	Q9P1D8	64 aa		5.67	□□□□□ -1.5
NEDD4L-223	ENST00000588516	MT1B	P07438	61 aa		5.62	□□□□□ -1.51
NEDD4L-223	ENST00000588516	KRTAP10-5	P60370	271 aa		5.59	□□□□□ -1.51
NEDD4L-223	ENST00000588516	KRTAP2-3	P0C7H8	128 aa		5.58	□□□□□ -1.52
NEDD4L-223	ENST00000588516	MT1X	P80297	61 aa		5.58	□□□□□ -1.52
NEDD4L-223	ENST00000588516	KRTAP2-4	Q9BYR9	128 aa		5.58	□□□□□ -1.52
NEDD4L-223	ENST00000588516	KRTAP10-12	P60413	245 aa		5.57	□□□□□ -1.52
NEDD4L-223	ENST00000588516	KMT2D	O14686	5537 aa		5.54	□□□□□ -1.52
NEDD4L-223	ENST00000588516	KRTAP12-3	P60328	96 aa		5.5	□□□□□ -1.53
NEDD4L-223	ENST00000588516	KRTAP5-9	P26371	169 aa		5.48	□□□□□ -1.53
NEDD4L-223	ENST00000588516	MDN1	Q9NU22	5596 aa		5.45	□□□□□ -1.54
NEDD4L-223	ENST00000588516	KRTAP2-2	Q9BYT5	123 aa		5.37	□□□□□ -1.55
NEDD4L-223	ENST00000588516	KRTAP2-1	Q9BYU5	128 aa		5.37	□□□□□ -1.55
NEDD4L-223	ENST00000588516	KRTAP10-7	P60409	375 aa	Predicted RBP	5.35	□□□□□ -1.55
NEDD4L-223	ENST00000588516	SPRR2E	P22531	72 aa		5.31	□□□□□ -1.56
NEDD4L-223	ENST00000588516	SPRR2B	P35325	72 aa		5.31	□□□□□ -1.56
NEDD4L-223	ENST00000588516	SPRR2A	P35326	72 aa		5.31	□□□□□ -1.56
NEDD4L-223	ENST00000588516	GPR98	Q8WXG9	6306 aa		5.26	□□□□□ -1.57
NEDD4L-223	ENST00000588516	INE1	O15225	51 aa		5.26	□□□□□ -1.57
NEDD4L-223	ENST00000588516	SPRR2F	Q96RM1	72 aa		5.24	□□□□□ -1.57
NEDD4L-223	ENST00000588516	KRTAP19-5	Q3LI72	72 aa		5.2	□□□□□ -1.58
NEDD4L-223	ENST00000588516	LCE3C	Q5T5A8	94 aa		5.19	□□□□□ -1.58
NEDD4L-223	ENST00000588516	SPRR2D	P22532	72 aa		5.15	□□□□□ -1.59
NEDD4L-223	ENST00000588516	LCE1A	Q5T7P2	110 aa		5.12	□□□□□ -1.59
NEDD4L-223	ENST00000588516	KRTAP19-7	Q3SYF9	63 aa		4.96	□□□□□ -1.62
NEDD4L-223	ENST00000588516	DST	Q03001	7570 aa	Known RBP	4.89	□□□□□ -1.63
NEDD4L-223	ENST00000588516	MT1E	P04732	61 aa		4.87	□□□□□ -1.63
NEDD4L-223	ENST00000588516	MT1L	Q93083	61 aa		4.87	□□□□□ -1.63
NEDD4L-223	ENST00000588516	KRTAP9-6	A8MVA2	160 aa		4.77	□□□□□ -1.65
NEDD4L-223	ENST00000588516	MT1G	P13640	62 aa		4.67	□□□□□ -1.66
NEDD4L-223	ENST00000588516	KRTAP5-10	Q6L8G5	202 aa		4.6	□□□□□ -1.67
NEDD4L-223	ENST00000588516	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.6	□□□□□ -1.67
NEDD4L-223	ENST00000588516	KRTAP19-3	Q7Z4W3	81 aa		4.6	□□□□□ -1.67
NEDD4L-223	ENST00000588516	AHNAK2	Q8IVF2	5795 aa		4.59	□□□□□ -1.68
NEDD4L-223	ENST00000588516	HMCN1	Q96RW7	5635 aa		4.57	□□□□□ -1.68
NEDD4L-223	ENST00000588516	MT4	P47944	62 aa		4.56	□□□□□ -1.68
NEDD4L-223	ENST00000588516	MT1M	Q8N339	61 aa		4.56	□□□□□ -1.68
NEDD4L-223	ENST00000588516	KRTAP5-7	Q6L8G8	165 aa		4.51	□□□□□ -1.69
NEDD4L-223	ENST00000588516	KRTAP5-11	Q6L8G4	156 aa		4.44	□□□□□ -1.7
NEDD4L-223	ENST00000588516	KRTAP4-3	Q9BYR4	195 aa		4.38	□□□□□ -1.71
NEDD4L-223	ENST00000588516	KRTAP5-4	Q6L8H1	288 aa		4.24	□□□□□ -1.73
NEDD4L-223	ENST00000588516	MT1A	P04731	61 aa		4.22	□□□□□ -1.73
NEDD4L-223	ENST00000588516	KRTAP12-4	P60329	112 aa		4.2	□□□□□ -1.74
NEDD4L-223	ENST00000588516	LCE1E	Q5T753	118 aa		4.14	□□□□□ -1.75
NEDD4L-223	ENST00000588516	KRTAP20-2	Q3LI61	65 aa		4.08	□□□□□ -1.76
NEDD4L-223	ENST00000588516	KRTAP6-1	Q3LI64	71 aa		4.05	□□□□□ -1.76
NEDD4L-223	ENST00000588516	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.02	□□□□□ -1.77
NEDD4L-223	ENST00000588516	LCE3D	Q9BYE3	92 aa		4.01	□□□□□ -1.77
NEDD4L-223	ENST00000588516	MT3	P25713	68 aa		3.99	□□□□□ -1.77
NEDD4L-223	ENST00000588516	LCE3E	Q5T5B0	92 aa		3.98	□□□□□ -1.77
NEDD4L-223	ENST00000588516	KRTAP5-1	Q6L8H4	278 aa		3.96	□□□□□ -1.77
NEDD4L-223	ENST00000588516	AHNAK	Q09666	5890 aa	Known RBP	3.94	□□□□□ -1.78
NEDD4L-223	ENST00000588516	MUC5AC	P98088	5654 aa		3.89	□□□□□ -1.79
NEDD4L-223	ENST00000588516	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.86	□□□□□ -1.79
NEDD4L-223	ENST00000588516	KRTAP4-4	Q9BYR3	166 aa		3.82	□□□□□ -1.8
NEDD4L-223	ENST00000588516	KRTAP5-8	O75690	187 aa		3.8	□□□□□ -1.8
NEDD4L-223	ENST00000588516	SYNE1	Q8NF91	8797 aa	Known RBP	3.78	□□□□□ -1.8
NEDD4L-223	ENST00000588516	LCE1F	Q5T754	118 aa		3.7	□□□□□ -1.82
NEDD4L-223	ENST00000588516	PRM1	P04553	51 aa		3.67	□□□□□ -1.82
NEDD4L-223	ENST00000588516	KRTAP6-2	Q3LI66	62 aa		3.66	□□□□□ -1.82
NEDD4L-223	ENST00000588516	KRTAP5-2	Q701N4	177 aa		3.6	□□□□□ -1.83
NEDD4L-223	ENST00000588516	OBSCN	Q5VST9	7968 aa		3.56	□□□□□ -1.84
NEDD4L-223	ENST00000588516	LCE1B	Q5T7P3	118 aa		2.94	□□□□□ -1.94
NEDD4L-223	ENST00000588516	LCE1C	Q5T751	118 aa		2.93	□□□□□ -1.94
NEDD4L-223	ENST00000588516	PHGR1	C9JFL3	82 aa		2.75	□□□□□ -1.97
NEDD4L-223	ENST00000588516	KRTAP21-2	Q3LI59	83 aa		2.64	□□□□□ -1.99
NEDD4L-223	ENST00000588516	KRTAP21-1	Q3LI58	79 aa		2.37	□□□□□ -2.03
NEDD4L-223	ENST00000588516	MUC19	Q7Z5P9	8384 aa		2.31	□□□□□ -2.04
NEDD4L-223	ENST00000588516	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms