RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
CCDC43-203ENST00000588210 NEBP20929 6669 aa5.5□□□□□ -1.53
CCDC43-203ENST00000588210 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
CCDC43-203ENST00000588210 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
CCDC43-203ENST00000588210 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
CCDC43-203ENST00000588210 SPRR2EP22531 72 aa5.36□□□□□ -1.55
CCDC43-203ENST00000588210 SPRR2BP35325 72 aa5.36□□□□□ -1.55
CCDC43-203ENST00000588210 SPRR2AP35326 72 aa5.36□□□□□ -1.55
CCDC43-203ENST00000588210 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
CCDC43-203ENST00000588210 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
CCDC43-203ENST00000588210 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
CCDC43-203ENST00000588210 INE1O15225 51 aa5.28□□□□□ -1.56
CCDC43-203ENST00000588210 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
CCDC43-203ENST00000588210 MT1EP04732 61 aa5.22□□□□□ -1.57
CCDC43-203ENST00000588210 KRTAP20-1Q3LI63 56 aa5.2□□□□□ -1.58
CCDC43-203ENST00000588210 SPRR2DP22532 72 aa5.17□□□□□ -1.58
CCDC43-203ENST00000588210 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
CCDC43-203ENST00000588210 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
CCDC43-203ENST00000588210 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
CCDC43-203ENST00000588210 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
CCDC43-203ENST00000588210 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
CCDC43-203ENST00000588210 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
CCDC43-203ENST00000588210 MT1GP13640 62 aa5.05□□□□□ -1.6
CCDC43-203ENST00000588210 MT1LQ93083 61 aa5.03□□□□□ -1.6
CCDC43-203ENST00000588210 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
CCDC43-203ENST00000588210 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
CCDC43-203ENST00000588210 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
CCDC43-203ENST00000588210 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.61
CCDC43-203ENST00000588210 MT1MQ8N339 61 aa4.95□□□□□ -1.62
CCDC43-203ENST00000588210 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
CCDC43-203ENST00000588210 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
CCDC43-203ENST00000588210 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
CCDC43-203ENST00000588210 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
CCDC43-203ENST00000588210 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
CCDC43-203ENST00000588210 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
CCDC43-203ENST00000588210 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
CCDC43-203ENST00000588210 MT4P47944 62 aa4.49□□□□□ -1.69
CCDC43-203ENST00000588210 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
CCDC43-203ENST00000588210 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
CCDC43-203ENST00000588210 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
CCDC43-203ENST00000588210 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
CCDC43-203ENST00000588210 MT1AP04731 61 aa4.3□□□□□ -1.72
CCDC43-203ENST00000588210 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
CCDC43-203ENST00000588210 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
CCDC43-203ENST00000588210 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
CCDC43-203ENST00000588210 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
CCDC43-203ENST00000588210 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
CCDC43-203ENST00000588210 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
CCDC43-203ENST00000588210 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
CCDC43-203ENST00000588210 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
CCDC43-203ENST00000588210 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
CCDC43-203ENST00000588210 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CCDC43-203ENST00000588210 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CCDC43-203ENST00000588210 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
CCDC43-203ENST00000588210 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
CCDC43-203ENST00000588210 MT3P25713 68 aa3.93□□□□□ -1.78
CCDC43-203ENST00000588210 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
CCDC43-203ENST00000588210 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
CCDC43-203ENST00000588210 PRM1P04553 51 aa3.83□□□□□ -1.8
CCDC43-203ENST00000588210 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
CCDC43-203ENST00000588210 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
CCDC43-203ENST00000588210 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
CCDC43-203ENST00000588210 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CCDC43-203ENST00000588210 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
CCDC43-203ENST00000588210 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
CCDC43-203ENST00000588210 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
CCDC43-203ENST00000588210 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
CCDC43-203ENST00000588210 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
CCDC43-203ENST00000588210 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
CCDC43-203ENST00000588210 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CCDC43-203ENST00000588210 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CCDC43-203ENST00000588210 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CCDC43-203ENST00000588210 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
CCDC43-203ENST00000588210 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CCDC43-203ENST00000588210 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
CCDC43-203ENST00000588210 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CCDC43-203ENST00000588210 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms