RNA–Protein interactions for RNA: ENST00000587877.1

LINC01478-201, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 1 (best) BASIC

Gene LINC01478, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-201ENST00000587877 M0R2T5 61 aa2.34□□□□□ -2.03
LINC01478-201ENST00000587877 MT1HP80294 61 aa2.33□□□□□ -2.04
LINC01478-201ENST00000587877 MT2AP02795 61 aa2.33□□□□□ -2.04
LINC01478-201ENST00000587877 INE1O15225 51 aa2.32□□□□□ -2.04
LINC01478-201ENST00000587877 PRO2289Q9P1D8 64 aa2.32□□□□□ -2.04
LINC01478-201ENST00000587877 MT1FP04733 61 aa2.32□□□□□ -2.04
LINC01478-201ENST00000587877 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
LINC01478-201ENST00000587877 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
LINC01478-201ENST00000587877 PCLOQ9Y6V0 5065 aa2.3□□□□□ -2.04
LINC01478-201ENST00000587877 MT3P25713 68 aa2.29□□□□□ -2.04
LINC01478-201ENST00000587877 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
LINC01478-201ENST00000587877 MUC2Q02817 5179 aa2.28□□□□□ -2.04
LINC01478-201ENST00000587877 MT1BP07438 61 aa2.28□□□□□ -2.04
LINC01478-201ENST00000587877 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
LINC01478-201ENST00000587877 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
LINC01478-201ENST00000587877 MT1XP80297 61 aa2.28□□□□□ -2.04
LINC01478-201ENST00000587877 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
LINC01478-201ENST00000587877 LCE3CQ5T5A8 94 aa2.22□□□□□ -2.05
LINC01478-201ENST00000587877 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
LINC01478-201ENST00000587877 RNF213Q63HN8 5207 aa2.16□□□□□ -2.06
LINC01478-201ENST00000587877 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
LINC01478-201ENST00000587877 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
LINC01478-201ENST00000587877 KRTAP9-6A8MVA2 160 aa2.11□□□□□ -2.07
LINC01478-201ENST00000587877 KRTAP2-3P0C7H8 128 aa2.06□□□□□ -2.08
LINC01478-201ENST00000587877 KRTAP2-4Q9BYR9 128 aa2.06□□□□□ -2.08
LINC01478-201ENST00000587877 KRTAP2-1Q9BYU5 128 aa2.06□□□□□ -2.08
LINC01478-201ENST00000587877 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
LINC01478-201ENST00000587877 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
LINC01478-201ENST00000587877 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
LINC01478-201ENST00000587877 MT1LQ93083 61 aa1.98□□□□□ -2.09
LINC01478-201ENST00000587877 MT1EP04732 61 aa1.97□□□□□ -2.09
LINC01478-201ENST00000587877 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
LINC01478-201ENST00000587877 USH2AO75445 5202 aa1.88□□□□□ -2.11
LINC01478-201ENST00000587877 KMT2DO14686 5537 aa1.87□□□□□ -2.11
LINC01478-201ENST00000587877 MT1GP13640 62 aa1.85□□□□□ -2.11
LINC01478-201ENST00000587877 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
LINC01478-201ENST00000587877 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
LINC01478-201ENST00000587877 MT1MQ8N339 61 aa1.84□□□□□ -2.12
LINC01478-201ENST00000587877 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
LINC01478-201ENST00000587877 SSPOA2VEC9 5147 aa1.82□□□□□ -2.12
LINC01478-201ENST00000587877 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
LINC01478-201ENST00000587877 MT1AP04731 61 aa1.76□□□□□ -2.13
LINC01478-201ENST00000587877 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
LINC01478-201ENST00000587877 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
LINC01478-201ENST00000587877 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
LINC01478-201ENST00000587877 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
LINC01478-201ENST00000587877 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
LINC01478-201ENST00000587877 MUC12Q9UKN1 5478 aa1.64□□□□□ -2.15
LINC01478-201ENST00000587877 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
LINC01478-201ENST00000587877 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
LINC01478-201ENST00000587877 PRM1P04553 51 aa1.59□□□□□ -2.15
LINC01478-201ENST00000587877 FSIP2Q5CZC0 6907 aa1.57□□□□□ -2.16
LINC01478-201ENST00000587877 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
LINC01478-201ENST00000587877 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
LINC01478-201ENST00000587877 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
LINC01478-201ENST00000587877 SPRR2EP22531 72 aa1.52□□□□□ -2.17
LINC01478-201ENST00000587877 SPRR2BP35325 72 aa1.52□□□□□ -2.17
LINC01478-201ENST00000587877 SPRR2AP35326 72 aa1.52□□□□□ -2.17
LINC01478-201ENST00000587877 MACF1Q9UPN3 7388 aaKnown RBP1.52□□□□□ -2.17
LINC01478-201ENST00000587877 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
LINC01478-201ENST00000587877 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
LINC01478-201ENST00000587877 SPRR2DP22532 72 aa1.46□□□□□ -2.18
LINC01478-201ENST00000587877 MDN1Q9NU22 5596 aa1.44□□□□□ -2.18
LINC01478-201ENST00000587877 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
LINC01478-201ENST00000587877 NEBP20929 6669 aa1.37□□□□□ -2.19
LINC01478-201ENST00000587877 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
LINC01478-201ENST00000587877 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
LINC01478-201ENST00000587877 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
LINC01478-201ENST00000587877 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
LINC01478-201ENST00000587877 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
LINC01478-201ENST00000587877 MT4P47944 62 aa1.24□□□□□ -2.21
LINC01478-201ENST00000587877 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
LINC01478-201ENST00000587877 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
LINC01478-201ENST00000587877 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
LINC01478-201ENST00000587877 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
LINC01478-201ENST00000587877 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
LINC01478-201ENST00000587877 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 89.1 ms