RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	MT1L	Q93083	61 aa		7.9	□□□□□ -1.14
CIRBP-208	ENST00000586548	KRTAP9-7	A8MTY7	169 aa		7.86	□□□□□ -1.15
CIRBP-208	ENST00000586548	KRTAP6-3	Q3LI67	103 aa		7.77	□□□□□ -1.17
CIRBP-208	ENST00000586548	SPRR2F	Q96RM1	72 aa		7.67	□□□□□ -1.18
CIRBP-208	ENST00000586548	KRTAP4-7	Q9BYR0	210 aa		7.67	□□□□□ -1.18
CIRBP-208	ENST00000586548	KRTAP5-9	P26371	169 aa		7.66	□□□□□ -1.18
CIRBP-208	ENST00000586548	KRTAP19-3	Q7Z4W3	81 aa		7.66	□□□□□ -1.18
CIRBP-208	ENST00000586548	MUC12	Q9UKN1	5478 aa		7.65	□□□□□ -1.19
CIRBP-208	ENST00000586548	MT1G	P13640	62 aa		7.61	□□□□□ -1.19
CIRBP-208	ENST00000586548	KRTAP9-6	A8MVA2	160 aa		7.53	□□□□□ -1.2
CIRBP-208	ENST00000586548	MT1M	Q8N339	61 aa		7.53	□□□□□ -1.2
CIRBP-208	ENST00000586548		H3BS24	57 aa		7.51	□□□□□ -1.21
CIRBP-208	ENST00000586548	LCE5A	Q5TCM9	118 aa		7.48	□□□□□ -1.21
CIRBP-208	ENST00000586548	KRTAP4-3	Q9BYR4	195 aa		7.4	□□□□□ -1.23
CIRBP-208	ENST00000586548	SPRR2E	P22531	72 aa		7.38	□□□□□ -1.23
CIRBP-208	ENST00000586548	SPRR2B	P35325	72 aa		7.38	□□□□□ -1.23
CIRBP-208	ENST00000586548	SPRR2A	P35326	72 aa		7.38	□□□□□ -1.23
CIRBP-208	ENST00000586548	MDN1	Q9NU22	5596 aa		7.35	□□□□□ -1.23
CIRBP-208	ENST00000586548	LCE1A	Q5T7P2	110 aa		7.32	□□□□□ -1.24
CIRBP-208	ENST00000586548	NEB	P20929	6669 aa		7.27	□□□□□ -1.25
CIRBP-208	ENST00000586548	LOC100996750	A0A140TA64	210 aa		7.19	□□□□□ -1.26
CIRBP-208	ENST00000586548		A0A0A0MQY5	61 aa		7.17	□□□□□ -1.26
CIRBP-208	ENST00000586548	SPRR2D	P22532	72 aa		7.12	□□□□□ -1.27
CIRBP-208	ENST00000586548	KRTAP2-3	P0C7H8	128 aa		7.08	□□□□□ -1.28
CIRBP-208	ENST00000586548	KRTAP2-4	Q9BYR9	128 aa		7.08	□□□□□ -1.28
CIRBP-208	ENST00000586548	KRTAP2-1	Q9BYU5	128 aa		7.08	□□□□□ -1.28
CIRBP-208	ENST00000586548	DST	Q03001	7570 aa	Known RBP	7.06	□□□□□ -1.28
CIRBP-208	ENST00000586548	KRTAP20-1	Q3LI63	56 aa		6.94	□□□□□ -1.3
CIRBP-208	ENST00000586548	LCE3B	Q5TA77	95 aa		6.87	□□□□□ -1.31
CIRBP-208	ENST00000586548	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.77	□□□□□ -1.33
CIRBP-208	ENST00000586548	KRTAP2-2	Q9BYT5	123 aa		6.73	□□□□□ -1.33
CIRBP-208	ENST00000586548	MT1A	P04731	61 aa		6.71	□□□□□ -1.34
CIRBP-208	ENST00000586548	INE1	O15225	51 aa		6.68	□□□□□ -1.34
CIRBP-208	ENST00000586548	KRTAP6-1	Q3LI64	71 aa		6.65	□□□□□ -1.34
CIRBP-208	ENST00000586548	SYNE1	Q8NF91	8797 aa	Known RBP	6.41	□□□□□ -1.38
CIRBP-208	ENST00000586548	KRTAP9-4	Q9BYQ2	154 aa		6.35	□□□□□ -1.39
CIRBP-208	ENST00000586548	KRTAP5-4	Q6L8H1	288 aa		6.34	□□□□□ -1.39
CIRBP-208	ENST00000586548	LCE4A	Q5TA78	99 aa		6.29	□□□□□ -1.4
CIRBP-208	ENST00000586548	KRTAP4-9	Q9BYQ8	210 aa		6.26	□□□□□ -1.41
CIRBP-208	ENST00000586548	KRTAP12-4	P60329	112 aa		6.22	□□□□□ -1.41
CIRBP-208	ENST00000586548	MT4	P47944	62 aa		6.2	□□□□□ -1.42
CIRBP-208	ENST00000586548	LCE1D	Q5T752	114 aa		6.16	□□□□□ -1.42
CIRBP-208	ENST00000586548	KRTAP6-2	Q3LI66	62 aa		6.08	□□□□□ -1.44
CIRBP-208	ENST00000586548	KRTAP4-6	Q9BYQ5	205 aa		6.07	□□□□□ -1.44
CIRBP-208	ENST00000586548	MT3	P25713	68 aa		6.06	□□□□□ -1.44
CIRBP-208	ENST00000586548	LCE3D	Q9BYE3	92 aa		6.01	□□□□□ -1.45
CIRBP-208	ENST00000586548	HMCN1	Q96RW7	5635 aa		5.97	□□□□□ -1.45
CIRBP-208	ENST00000586548	KRTAP20-2	Q3LI61	65 aa		5.92	□□□□□ -1.46
CIRBP-208	ENST00000586548	LCE3E	Q5T5B0	92 aa		5.88	□□□□□ -1.47
CIRBP-208	ENST00000586548	KRTAP5-2	Q701N4	177 aa		5.8	□□□□□ -1.48
CIRBP-208	ENST00000586548	KRTAP5-3	Q6L8H2	238 aa		5.69	□□□□□ -1.5
CIRBP-208	ENST00000586548	OBSCN	Q5VST9	7968 aa		5.54	□□□□□ -1.52
CIRBP-208	ENST00000586548	AHNAK2	Q8IVF2	5795 aa		5.49	□□□□□ -1.53
CIRBP-208	ENST00000586548	KRTAP5-10	Q6L8G5	202 aa		5.37	□□□□□ -1.55
CIRBP-208	ENST00000586548	GPR98	Q8WXG9	6306 aa		5.31	□□□□□ -1.56
CIRBP-208	ENST00000586548	KRTAP4-11	Q9BYQ6	195 aa		5.25	□□□□□ -1.57
CIRBP-208	ENST00000586548	PRM1	P04553	51 aa		5.24	□□□□□ -1.57
CIRBP-208	ENST00000586548	LCE1E	Q5T753	118 aa		5.2	□□□□□ -1.58
CIRBP-208	ENST00000586548	KRTAP5-7	Q6L8G8	165 aa		5.06	□□□□□ -1.6
CIRBP-208	ENST00000586548	KRTAP5-8	O75690	187 aa		5.05	□□□□□ -1.6
CIRBP-208	ENST00000586548	KRTAP5-1	Q6L8H4	278 aa		4.97	□□□□□ -1.61
CIRBP-208	ENST00000586548	MUC5AC	P98088	5654 aa		4.94	□□□□□ -1.62
CIRBP-208	ENST00000586548	LCE1B	Q5T7P3	118 aa		4.89	□□□□□ -1.63
CIRBP-208	ENST00000586548	LCE1C	Q5T751	118 aa		4.85	□□□□□ -1.63
CIRBP-208	ENST00000586548	KRTAP4-2	Q9BYR5	136 aa		4.85	□□□□□ -1.63
CIRBP-208	ENST00000586548	KRTAP9-9	Q9BYP9	154 aa		4.7	□□□□□ -1.66
CIRBP-208	ENST00000586548	KRTAP4-12	Q9BQ66	201 aa		4.58	□□□□□ -1.68
CIRBP-208	ENST00000586548	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.57	□□□□□ -1.68
CIRBP-208	ENST00000586548	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.43	□□□□□ -1.7
CIRBP-208	ENST00000586548	KRTAP21-2	Q3LI59	83 aa		4.35	□□□□□ -1.71
CIRBP-208	ENST00000586548	KRTAP5-11	Q6L8G4	156 aa		4.26	□□□□□ -1.73
CIRBP-208	ENST00000586548	AHNAK	Q09666	5890 aa	Known RBP	4.25	□□□□□ -1.73
CIRBP-208	ENST00000586548	KRTAP4-4	Q9BYR3	166 aa		3.84	□□□□□ -1.79
CIRBP-208	ENST00000586548	LCE1F	Q5T754	118 aa		3.81	□□□□□ -1.8
CIRBP-208	ENST00000586548	PHGR1	C9JFL3	82 aa		3.65	□□□□□ -1.82
CIRBP-208	ENST00000586548	MUC19	Q7Z5P9	8384 aa		3.27	□□□□□ -1.89
CIRBP-208	ENST00000586548	KRTAP21-1	Q3LI58	79 aa		3.25	□□□□□ -1.89
CIRBP-208	ENST00000586548	MUC16	Q8WXI7	14507 aa		2.44	□□□□□ -2.02

Retrieved 78 of 20,778 RNA–protein pairs in 90 ms