RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
CDH8-214ENST00000585315 LCE2DQ5TA82 110 aaPredicted RBP2.18□□□□□ -2.06
CDH8-214ENST00000585315 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
CDH8-214ENST00000585315 MT1AP04731 61 aa2.16□□□□□ -2.06
CDH8-214ENST00000585315 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
CDH8-214ENST00000585315 TNXBP22105 4242 aa2.13□□□□□ -2.07
CDH8-214ENST00000585315 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
CDH8-214ENST00000585315 RNF213Q63HN8 5207 aa2.09□□□□□ -2.07
CDH8-214ENST00000585315 BIRC6Q9NR09 4857 aa2.08□□□□□ -2.08
CDH8-214ENST00000585315 LCE1AQ5T7P2 110 aa2.07□□□□□ -2.08
CDH8-214ENST00000585315 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
CDH8-214ENST00000585315 LOC100996750A0A140TA64 210 aa2.06□□□□□ -2.08
CDH8-214ENST00000585315 MUC2Q02817 5179 aa2.06□□□□□ -2.08
CDH8-214ENST00000585315 LCE1DQ5T752 114 aa2.06□□□□□ -2.08
CDH8-214ENST00000585315 ABCA13Q86UQ4 5058 aa2.05□□□□□ -2.08
CDH8-214ENST00000585315 LPAP08519 4548 aa2.05□□□□□ -2.08
CDH8-214ENST00000585315 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
CDH8-214ENST00000585315 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
CDH8-214ENST00000585315 KRTAP4-3Q9BYR4 195 aa2.03□□□□□ -2.08
CDH8-214ENST00000585315 MT4P47944 62 aa2.03□□□□□ -2.08
CDH8-214ENST00000585315 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
CDH8-214ENST00000585315 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
CDH8-214ENST00000585315 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
CDH8-214ENST00000585315 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
CDH8-214ENST00000585315 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
CDH8-214ENST00000585315 KRTAP9-2Q9BYQ4 174 aa1.96□□□□□ -2.1
CDH8-214ENST00000585315 FAT4Q6V0I7 4981 aa1.96□□□□□ -2.1
CDH8-214ENST00000585315 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
CDH8-214ENST00000585315 KRTAP4-9Q9BYQ8 210 aa1.94□□□□□ -2.1
CDH8-214ENST00000585315 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
CDH8-214ENST00000585315 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CDH8-214ENST00000585315 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
CDH8-214ENST00000585315 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
CDH8-214ENST00000585315 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
CDH8-214ENST00000585315 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
CDH8-214ENST00000585315 USH2AO75445 5202 aa1.86□□□□□ -2.11
CDH8-214ENST00000585315 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CDH8-214ENST00000585315 KRTAP9-6A0A140TA67 174 aa1.83□□□□□ -2.12
CDH8-214ENST00000585315 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
CDH8-214ENST00000585315 KRTAP2-2Q9BYT5 123 aa1.82□□□□□ -2.12
CDH8-214ENST00000585315 KRTAP9-7A8MTY7 169 aa1.81□□□□□ -2.12
CDH8-214ENST00000585315 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
CDH8-214ENST00000585315 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
CDH8-214ENST00000585315 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
CDH8-214ENST00000585315 LCE1EQ5T753 118 aa1.72□□□□□ -2.13
CDH8-214ENST00000585315 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
CDH8-214ENST00000585315 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.72□□□□□ -2.13
CDH8-214ENST00000585315 KMT2DO14686 5537 aa1.7□□□□□ -2.14
CDH8-214ENST00000585315 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
CDH8-214ENST00000585315 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
CDH8-214ENST00000585315 NEBP20929 6669 aa1.65□□□□□ -2.14
CDH8-214ENST00000585315 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
CDH8-214ENST00000585315 KRTAP4-11Q9BYQ6 195 aa1.56□□□□□ -2.16
CDH8-214ENST00000585315 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
CDH8-214ENST00000585315 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
CDH8-214ENST00000585315 KRTAP4-6Q9BYQ5 205 aa1.5□□□□□ -2.17
CDH8-214ENST00000585315 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
CDH8-214ENST00000585315 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
CDH8-214ENST00000585315 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
CDH8-214ENST00000585315 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CDH8-214ENST00000585315 KRTAP5-4Q6L8H1 288 aa1.44□□□□□ -2.18
CDH8-214ENST00000585315 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CDH8-214ENST00000585315 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.2
CDH8-214ENST00000585315 KRTAP5-3Q6L8H2 238 aa1.28□□□□□ -2.2
CDH8-214ENST00000585315 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.2
CDH8-214ENST00000585315 KRTAP4-2Q9BYR5 136 aa1.28□□□□□ -2.2
CDH8-214ENST00000585315 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.24□□□□□ -2.21
CDH8-214ENST00000585315 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
CDH8-214ENST00000585315 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
CDH8-214ENST00000585315 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
CDH8-214ENST00000585315 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
CDH8-214ENST00000585315 KRTAP5-8O75690 187 aa1.09□□□□□ -2.24
CDH8-214ENST00000585315 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
CDH8-214ENST00000585315 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
CDH8-214ENST00000585315 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
CDH8-214ENST00000585315 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
CDH8-214ENST00000585315 KRTAP5-7Q6L8G8 165 aa0.82□□□□□ -2.28
CDH8-214ENST00000585315 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms