RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
SS18-226ENST00000585241 MT1EP04732 61 aa5.94□□□□□ -1.46
SS18-226ENST00000585241 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
SS18-226ENST00000585241 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
SS18-226ENST00000585241 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
SS18-226ENST00000585241 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
SS18-226ENST00000585241 MT1LQ93083 61 aa5.78□□□□□ -1.48
SS18-226ENST00000585241 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
SS18-226ENST00000585241 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
SS18-226ENST00000585241 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
SS18-226ENST00000585241 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
SS18-226ENST00000585241 SPRR2EP22531 72 aa5.74□□□□□ -1.49
SS18-226ENST00000585241 SPRR2BP35325 72 aa5.74□□□□□ -1.49
SS18-226ENST00000585241 SPRR2AP35326 72 aa5.74□□□□□ -1.49
SS18-226ENST00000585241 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SS18-226ENST00000585241 NEBP20929 6669 aa5.7□□□□□ -1.5
SS18-226ENST00000585241 MT1GP13640 62 aa5.69□□□□□ -1.5
SS18-226ENST00000585241 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
SS18-226ENST00000585241 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
SS18-226ENST00000585241 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
SS18-226ENST00000585241 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
SS18-226ENST00000585241 MT1MQ8N339 61 aa5.61□□□□□ -1.51
SS18-226ENST00000585241 SPRR2DP22532 72 aa5.53□□□□□ -1.52
SS18-226ENST00000585241 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
SS18-226ENST00000585241 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
SS18-226ENST00000585241 H3BS24 57 aa5.48□□□□□ -1.53
SS18-226ENST00000585241 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
SS18-226ENST00000585241 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
SS18-226ENST00000585241 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
SS18-226ENST00000585241 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
SS18-226ENST00000585241 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
SS18-226ENST00000585241 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SS18-226ENST00000585241 KRTAP20-1Q3LI63 56 aa5.3□□□□□ -1.56
SS18-226ENST00000585241 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
SS18-226ENST00000585241 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
SS18-226ENST00000585241 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
SS18-226ENST00000585241 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SS18-226ENST00000585241 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
SS18-226ENST00000585241 MT1AP04731 61 aa4.94□□□□□ -1.62
SS18-226ENST00000585241 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
SS18-226ENST00000585241 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
SS18-226ENST00000585241 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
SS18-226ENST00000585241 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SS18-226ENST00000585241 MT4P47944 62 aa4.78□□□□□ -1.64
SS18-226ENST00000585241 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
SS18-226ENST00000585241 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.65
SS18-226ENST00000585241 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
SS18-226ENST00000585241 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
SS18-226ENST00000585241 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
SS18-226ENST00000585241 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
SS18-226ENST00000585241 MT3P25713 68 aa4.46□□□□□ -1.7
SS18-226ENST00000585241 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
SS18-226ENST00000585241 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
SS18-226ENST00000585241 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
SS18-226ENST00000585241 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
SS18-226ENST00000585241 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
SS18-226ENST00000585241 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
SS18-226ENST00000585241 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SS18-226ENST00000585241 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
SS18-226ENST00000585241 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
SS18-226ENST00000585241 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
SS18-226ENST00000585241 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
SS18-226ENST00000585241 INE1O15225 51 aa3.87□□□□□ -1.79
SS18-226ENST00000585241 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
SS18-226ENST00000585241 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
SS18-226ENST00000585241 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SS18-226ENST00000585241 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
SS18-226ENST00000585241 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
SS18-226ENST00000585241 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
SS18-226ENST00000585241 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
SS18-226ENST00000585241 PRM1P04553 51 aa3.31□□□□□ -1.88
SS18-226ENST00000585241 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SS18-226ENST00000585241 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
SS18-226ENST00000585241 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SS18-226ENST00000585241 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
SS18-226ENST00000585241 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SS18-226ENST00000585241 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
SS18-226ENST00000585241 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 33.1 ms