RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
RNF43-207ENST00000583753 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
RNF43-207ENST00000583753 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
RNF43-207ENST00000583753 MT1LQ93083 61 aa3.53□□□□□ -1.84
RNF43-207ENST00000583753 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
RNF43-207ENST00000583753 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
RNF43-207ENST00000583753 MT1EP04732 61 aa3.5□□□□□ -1.85
RNF43-207ENST00000583753 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
RNF43-207ENST00000583753 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
RNF43-207ENST00000583753 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
RNF43-207ENST00000583753 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
RNF43-207ENST00000583753 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
RNF43-207ENST00000583753 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
RNF43-207ENST00000583753 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
RNF43-207ENST00000583753 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
RNF43-207ENST00000583753 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
RNF43-207ENST00000583753 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
RNF43-207ENST00000583753 MT1MQ8N339 61 aa3.3□□□□□ -1.88
RNF43-207ENST00000583753 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
RNF43-207ENST00000583753 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
RNF43-207ENST00000583753 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
RNF43-207ENST00000583753 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
RNF43-207ENST00000583753 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
RNF43-207ENST00000583753 PRM1P04553 51 aa3.13□□□□□ -1.91
RNF43-207ENST00000583753 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
RNF43-207ENST00000583753 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
RNF43-207ENST00000583753 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
RNF43-207ENST00000583753 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
RNF43-207ENST00000583753 SPRR2EP22531 72 aa3.04□□□□□ -1.92
RNF43-207ENST00000583753 SPRR2BP35325 72 aa3.04□□□□□ -1.92
RNF43-207ENST00000583753 SPRR2AP35326 72 aa3.04□□□□□ -1.92
RNF43-207ENST00000583753 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
RNF43-207ENST00000583753 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
RNF43-207ENST00000583753 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
RNF43-207ENST00000583753 MT1AP04731 61 aa2.94□□□□□ -1.94
RNF43-207ENST00000583753 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
RNF43-207ENST00000583753 SPRR2DP22532 72 aa2.89□□□□□ -1.95
RNF43-207ENST00000583753 NEBP20929 6669 aa2.88□□□□□ -1.95
RNF43-207ENST00000583753 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
RNF43-207ENST00000583753 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
RNF43-207ENST00000583753 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
RNF43-207ENST00000583753 MT3P25713 68 aa2.78□□□□□ -1.96
RNF43-207ENST00000583753 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
RNF43-207ENST00000583753 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
RNF43-207ENST00000583753 MT4P47944 62 aa2.73□□□□□ -1.97
RNF43-207ENST00000583753 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
RNF43-207ENST00000583753 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
RNF43-207ENST00000583753 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
RNF43-207ENST00000583753 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
RNF43-207ENST00000583753 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
RNF43-207ENST00000583753 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
RNF43-207ENST00000583753 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
RNF43-207ENST00000583753 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
RNF43-207ENST00000583753 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
RNF43-207ENST00000583753 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
RNF43-207ENST00000583753 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
RNF43-207ENST00000583753 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
RNF43-207ENST00000583753 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
RNF43-207ENST00000583753 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
RNF43-207ENST00000583753 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
RNF43-207ENST00000583753 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
RNF43-207ENST00000583753 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
RNF43-207ENST00000583753 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
RNF43-207ENST00000583753 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
RNF43-207ENST00000583753 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
RNF43-207ENST00000583753 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
RNF43-207ENST00000583753 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
RNF43-207ENST00000583753 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
RNF43-207ENST00000583753 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
RNF43-207ENST00000583753 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
RNF43-207ENST00000583753 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
RNF43-207ENST00000583753 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
RNF43-207ENST00000583753 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RNF43-207ENST00000583753 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
RNF43-207ENST00000583753 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
RNF43-207ENST00000583753 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
RNF43-207ENST00000583753 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms