RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
ERBB2-212ENST00000582788 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
ERBB2-212ENST00000582788 KRTAP6-3Q3LI67 103 aa6.26□□□□□ -1.41
ERBB2-212ENST00000582788 MT1EP04732 61 aa6.13□□□□□ -1.43
ERBB2-212ENST00000582788 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
ERBB2-212ENST00000582788 MUC12Q9UKN1 5478 aa6.07□□□□□ -1.44
ERBB2-212ENST00000582788 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
ERBB2-212ENST00000582788 MT1LQ93083 61 aa6.03□□□□□ -1.44
ERBB2-212ENST00000582788 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
ERBB2-212ENST00000582788 NEBP20929 6669 aa5.97□□□□□ -1.45
ERBB2-212ENST00000582788 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
ERBB2-212ENST00000582788 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
ERBB2-212ENST00000582788 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
ERBB2-212ENST00000582788 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
ERBB2-212ENST00000582788 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
ERBB2-212ENST00000582788 KRTAP2-1Q9BYU5 128 aa5.92□□□□□ -1.46
ERBB2-212ENST00000582788 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
ERBB2-212ENST00000582788 SPRR2EP22531 72 aa5.81□□□□□ -1.48
ERBB2-212ENST00000582788 SPRR2BP35325 72 aa5.81□□□□□ -1.48
ERBB2-212ENST00000582788 SPRR2AP35326 72 aa5.81□□□□□ -1.48
ERBB2-212ENST00000582788 MT1GP13640 62 aa5.79□□□□□ -1.48
ERBB2-212ENST00000582788 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
ERBB2-212ENST00000582788 MT1MQ8N339 61 aa5.75□□□□□ -1.49
ERBB2-212ENST00000582788 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
ERBB2-212ENST00000582788 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
ERBB2-212ENST00000582788 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
ERBB2-212ENST00000582788 SPRR2DP22532 72 aa5.61□□□□□ -1.51
ERBB2-212ENST00000582788 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
ERBB2-212ENST00000582788 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
ERBB2-212ENST00000582788 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
ERBB2-212ENST00000582788 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
ERBB2-212ENST00000582788 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
ERBB2-212ENST00000582788 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
ERBB2-212ENST00000582788 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
ERBB2-212ENST00000582788 MT1AP04731 61 aa5.09□□□□□ -1.59
ERBB2-212ENST00000582788 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
ERBB2-212ENST00000582788 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
ERBB2-212ENST00000582788 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
ERBB2-212ENST00000582788 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
ERBB2-212ENST00000582788 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
ERBB2-212ENST00000582788 MT4P47944 62 aa4.89□□□□□ -1.63
ERBB2-212ENST00000582788 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
ERBB2-212ENST00000582788 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.64
ERBB2-212ENST00000582788 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
ERBB2-212ENST00000582788 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
ERBB2-212ENST00000582788 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
ERBB2-212ENST00000582788 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
ERBB2-212ENST00000582788 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
ERBB2-212ENST00000582788 PRM1P04553 51 aa4.63□□□□□ -1.67
ERBB2-212ENST00000582788 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
ERBB2-212ENST00000582788 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
ERBB2-212ENST00000582788 MT3P25713 68 aa4.6□□□□□ -1.67
ERBB2-212ENST00000582788 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
ERBB2-212ENST00000582788 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
ERBB2-212ENST00000582788 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
ERBB2-212ENST00000582788 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
ERBB2-212ENST00000582788 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
ERBB2-212ENST00000582788 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
ERBB2-212ENST00000582788 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
ERBB2-212ENST00000582788 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
ERBB2-212ENST00000582788 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
ERBB2-212ENST00000582788 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
ERBB2-212ENST00000582788 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
ERBB2-212ENST00000582788 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
ERBB2-212ENST00000582788 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
ERBB2-212ENST00000582788 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
ERBB2-212ENST00000582788 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.81
ERBB2-212ENST00000582788 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
ERBB2-212ENST00000582788 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
ERBB2-212ENST00000582788 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
ERBB2-212ENST00000582788 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
ERBB2-212ENST00000582788 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
ERBB2-212ENST00000582788 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
ERBB2-212ENST00000582788 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
ERBB2-212ENST00000582788 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
ERBB2-212ENST00000582788 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
ERBB2-212ENST00000582788 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
ERBB2-212ENST00000582788 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 78.8 ms