RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 SPRR2AP35326 72 aa3.34□□□□□ -1.88
TRAPPC8-211ENST00000582539 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TRAPPC8-211ENST00000582539 MUC2Q02817 5179 aa3.28□□□□□ -1.88
TRAPPC8-211ENST00000582539 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
TRAPPC8-211ENST00000582539 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
TRAPPC8-211ENST00000582539 SPRR2DP22532 72 aa3.25□□□□□ -1.89
TRAPPC8-211ENST00000582539 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
TRAPPC8-211ENST00000582539 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
TRAPPC8-211ENST00000582539 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
TRAPPC8-211ENST00000582539 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
TRAPPC8-211ENST00000582539 USH2AO75445 5202 aa3.23□□□□□ -1.89
TRAPPC8-211ENST00000582539 MT1AP04731 61 aa3.17□□□□□ -1.9
TRAPPC8-211ENST00000582539 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
TRAPPC8-211ENST00000582539 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
TRAPPC8-211ENST00000582539 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC8-211ENST00000582539 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.91
TRAPPC8-211ENST00000582539 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
TRAPPC8-211ENST00000582539 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
TRAPPC8-211ENST00000582539 LCE4AQ5TA78 99 aa3.03□□□□□ -1.93
TRAPPC8-211ENST00000582539 MT3P25713 68 aa3.02□□□□□ -1.93
TRAPPC8-211ENST00000582539 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
TRAPPC8-211ENST00000582539 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
TRAPPC8-211ENST00000582539 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
TRAPPC8-211ENST00000582539 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
TRAPPC8-211ENST00000582539 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC8-211ENST00000582539 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
TRAPPC8-211ENST00000582539 LOC100996750A0A140TA64 210 aa2.91□□□□□ -1.94
TRAPPC8-211ENST00000582539 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
TRAPPC8-211ENST00000582539 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
TRAPPC8-211ENST00000582539 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC8-211ENST00000582539 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
TRAPPC8-211ENST00000582539 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
TRAPPC8-211ENST00000582539 KMT2DO14686 5537 aa2.72□□□□□ -1.97
TRAPPC8-211ENST00000582539 NEBP20929 6669 aa2.67□□□□□ -1.98
TRAPPC8-211ENST00000582539 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
TRAPPC8-211ENST00000582539 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.98
TRAPPC8-211ENST00000582539 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
TRAPPC8-211ENST00000582539 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
TRAPPC8-211ENST00000582539 MT4P47944 62 aa2.62□□□□□ -1.99
TRAPPC8-211ENST00000582539 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
TRAPPC8-211ENST00000582539 MUC12Q9UKN1 5478 aa2.53□□□□□ -2.01
TRAPPC8-211ENST00000582539 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
TRAPPC8-211ENST00000582539 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
TRAPPC8-211ENST00000582539 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
TRAPPC8-211ENST00000582539 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
TRAPPC8-211ENST00000582539 PRM1P04553 51 aa2.48□□□□□ -2.01
TRAPPC8-211ENST00000582539 LCE1DQ5T752 114 aa2.48□□□□□ -2.01
TRAPPC8-211ENST00000582539 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
TRAPPC8-211ENST00000582539 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
TRAPPC8-211ENST00000582539 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
TRAPPC8-211ENST00000582539 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
TRAPPC8-211ENST00000582539 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
TRAPPC8-211ENST00000582539 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
TRAPPC8-211ENST00000582539 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
TRAPPC8-211ENST00000582539 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
TRAPPC8-211ENST00000582539 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
TRAPPC8-211ENST00000582539 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
TRAPPC8-211ENST00000582539 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
TRAPPC8-211ENST00000582539 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
TRAPPC8-211ENST00000582539 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
TRAPPC8-211ENST00000582539 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
TRAPPC8-211ENST00000582539 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC8-211ENST00000582539 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
TRAPPC8-211ENST00000582539 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
TRAPPC8-211ENST00000582539 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.09
TRAPPC8-211ENST00000582539 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
TRAPPC8-211ENST00000582539 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
TRAPPC8-211ENST00000582539 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
TRAPPC8-211ENST00000582539 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
TRAPPC8-211ENST00000582539 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
TRAPPC8-211ENST00000582539 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC8-211ENST00000582539 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
TRAPPC8-211ENST00000582539 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
TRAPPC8-211ENST00000582539 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
TRAPPC8-211ENST00000582539 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
TRAPPC8-211ENST00000582539 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
TRAPPC8-211ENST00000582539 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms