RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
RNU4ATAC-201ENST00000580972 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
RNU4ATAC-201ENST00000580972 LCE1AQ5T7P2 110 aa2.14□□□□□ -2.07
RNU4ATAC-201ENST00000580972 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
RNU4ATAC-201ENST00000580972 SPRR2EP22531 72 aa2.13□□□□□ -2.07
RNU4ATAC-201ENST00000580972 SPRR2BP35325 72 aa2.13□□□□□ -2.07
RNU4ATAC-201ENST00000580972 SPRR2AP35326 72 aa2.13□□□□□ -2.07
RNU4ATAC-201ENST00000580972 MT1MQ8N339 61 aa2.13□□□□□ -2.07
RNU4ATAC-201ENST00000580972 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
RNU4ATAC-201ENST00000580972 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
RNU4ATAC-201ENST00000580972 LCE5AQ5TCM9 118 aa2.11□□□□□ -2.07
RNU4ATAC-201ENST00000580972 MT1GP13640 62 aa2.09□□□□□ -2.07
RNU4ATAC-201ENST00000580972 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
RNU4ATAC-201ENST00000580972 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
RNU4ATAC-201ENST00000580972 LOC100996750A0A140TA64 210 aa2.06□□□□□ -2.08
RNU4ATAC-201ENST00000580972 SPRR2DP22532 72 aa2.04□□□□□ -2.08
RNU4ATAC-201ENST00000580972 NEBP20929 6669 aa2.02□□□□□ -2.09
RNU4ATAC-201ENST00000580972 KRTAP19-4Q3LI73 84 aa1.98□□□□□ -2.09
RNU4ATAC-201ENST00000580972 LCE3BQ5TA77 95 aa1.96□□□□□ -2.1
RNU4ATAC-201ENST00000580972 NDUFAF8A1L188 74 aa1.94□□□□□ -2.1
RNU4ATAC-201ENST00000580972 LUZP6Q538Z0 58 aa1.91□□□□□ -2.1
RNU4ATAC-201ENST00000580972 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
RNU4ATAC-201ENST00000580972 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
RNU4ATAC-201ENST00000580972 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
RNU4ATAC-201ENST00000580972 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
RNU4ATAC-201ENST00000580972 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
RNU4ATAC-201ENST00000580972 MT1AP04731 61 aa1.86□□□□□ -2.11
RNU4ATAC-201ENST00000580972 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
RNU4ATAC-201ENST00000580972 KRTAP2-2Q9BYT5 123 aa1.84□□□□□ -2.11
RNU4ATAC-201ENST00000580972 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
RNU4ATAC-201ENST00000580972 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
RNU4ATAC-201ENST00000580972 KRTAP4-9Q9BYQ8 210 aa1.82□□□□□ -2.12
RNU4ATAC-201ENST00000580972 MT4P47944 62 aa1.81□□□□□ -2.12
RNU4ATAC-201ENST00000580972 KRTAP4-6Q9BYQ5 205 aa1.8□□□□□ -2.12
RNU4ATAC-201ENST00000580972 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
RNU4ATAC-201ENST00000580972 LCE1DQ5T752 114 aa1.77□□□□□ -2.13
RNU4ATAC-201ENST00000580972 LCE4AQ5TA78 99 aa1.77□□□□□ -2.13
RNU4ATAC-201ENST00000580972 KRTAP9-4Q9BYQ2 154 aa1.76□□□□□ -2.13
RNU4ATAC-201ENST00000580972 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
RNU4ATAC-201ENST00000580972 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
RNU4ATAC-201ENST00000580972 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
RNU4ATAC-201ENST00000580972 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
RNU4ATAC-201ENST00000580972 KRTAP5-3Q6L8H2 238 aa1.67□□□□□ -2.14
RNU4ATAC-201ENST00000580972 MT3P25713 68 aa1.66□□□□□ -2.14
RNU4ATAC-201ENST00000580972 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
RNU4ATAC-201ENST00000580972 H3BS24 57 aa1.62□□□□□ -2.15
RNU4ATAC-201ENST00000580972 A0A0A0MQY5 61 aa1.6□□□□□ -2.15
RNU4ATAC-201ENST00000580972 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
RNU4ATAC-201ENST00000580972 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
RNU4ATAC-201ENST00000580972 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
RNU4ATAC-201ENST00000580972 INE1O15225 51 aa1.5□□□□□ -2.17
RNU4ATAC-201ENST00000580972 KRTAP4-11Q9BYQ6 195 aa1.49□□□□□ -2.17
RNU4ATAC-201ENST00000580972 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
RNU4ATAC-201ENST00000580972 OBSCNQ5VST9 7968 aa1.45□□□□□ -2.18
RNU4ATAC-201ENST00000580972 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
RNU4ATAC-201ENST00000580972 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
RNU4ATAC-201ENST00000580972 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
RNU4ATAC-201ENST00000580972 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
RNU4ATAC-201ENST00000580972 LCE1EQ5T753 118 aa1.41□□□□□ -2.18
RNU4ATAC-201ENST00000580972 KRTAP4-2Q9BYR5 136 aa1.4□□□□□ -2.19
RNU4ATAC-201ENST00000580972 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
RNU4ATAC-201ENST00000580972 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
RNU4ATAC-201ENST00000580972 PRM1P04553 51 aa1.35□□□□□ -2.19
RNU4ATAC-201ENST00000580972 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
RNU4ATAC-201ENST00000580972 KRTAP9-9Q9BYP9 154 aa1.28□□□□□ -2.2
RNU4ATAC-201ENST00000580972 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
RNU4ATAC-201ENST00000580972 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.23□□□□□ -2.21
RNU4ATAC-201ENST00000580972 KRTAP4-12Q9BQ66 201 aa1.22□□□□□ -2.21
RNU4ATAC-201ENST00000580972 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
RNU4ATAC-201ENST00000580972 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
RNU4ATAC-201ENST00000580972 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
RNU4ATAC-201ENST00000580972 KRTAP4-4Q9BYR3 166 aa1.15□□□□□ -2.23
RNU4ATAC-201ENST00000580972 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
RNU4ATAC-201ENST00000580972 LCE1FQ5T754 118 aa1.03□□□□□ -2.24
RNU4ATAC-201ENST00000580972 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
RNU4ATAC-201ENST00000580972 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
RNU4ATAC-201ENST00000580972 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 69.6 ms