RNA–Protein interactions for RNA: ENST00000580861.1

LINC00511-210, long intergenic non-protein coding RNA 511, human

TSL 4

Gene LINC00511, Length 467 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00511-210	ENST00000580861	KMT2D	O14686	5537 aa		3.57	□□□□□ -1.84
LINC00511-210	ENST00000580861	KRTAP10-7	P60409	375 aa	Predicted RBP	3.57	□□□□□ -1.84
LINC00511-210	ENST00000580861	LCE5A	Q5TCM9	118 aa		3.57	□□□□□ -1.84
LINC00511-210	ENST00000580861	KRTAP10-12	P60413	245 aa		3.56	□□□□□ -1.84
LINC00511-210	ENST00000580861	KRTAP5-9	P26371	169 aa		3.54	□□□□□ -1.84
LINC00511-210	ENST00000580861	MUC12	Q9UKN1	5478 aa		3.5	□□□□□ -1.85
LINC00511-210	ENST00000580861	KRTAP8-1	Q8IUC2	63 aa		3.46	□□□□□ -1.86
LINC00511-210	ENST00000580861	NEB	P20929	6669 aa		3.44	□□□□□ -1.86
LINC00511-210	ENST00000580861	SPRR2F	Q96RM1	72 aa		3.42	□□□□□ -1.86
LINC00511-210	ENST00000580861	KRTAP15-1	Q3LI76	137 aa		3.39	□□□□□ -1.87
LINC00511-210	ENST00000580861	MDN1	Q9NU22	5596 aa		3.38	□□□□□ -1.87
LINC00511-210	ENST00000580861	KRTAP19-7	Q3SYF9	63 aa		3.36	□□□□□ -1.87
LINC00511-210	ENST00000580861	LCE1A	Q5T7P2	110 aa		3.36	□□□□□ -1.87
LINC00511-210	ENST00000580861	LCE3A	Q5TA76	89 aa		3.34	□□□□□ -1.87
LINC00511-210	ENST00000580861	SPRR2E	P22531	72 aa		3.32	□□□□□ -1.88
LINC00511-210	ENST00000580861	SPRR2B	P35325	72 aa		3.32	□□□□□ -1.88
LINC00511-210	ENST00000580861	SPRR2A	P35326	72 aa		3.32	□□□□□ -1.88
LINC00511-210	ENST00000580861	MT1E	P04732	61 aa		3.3	□□□□□ -1.88
LINC00511-210	ENST00000580861	KRTAP19-5	Q3LI72	72 aa		3.29	□□□□□ -1.88
LINC00511-210	ENST00000580861	LUZP6	Q538Z0	58 aa		3.29	□□□□□ -1.88
LINC00511-210	ENST00000580861	KRTAP12-3	P60328	96 aa		3.24	□□□□□ -1.89
LINC00511-210	ENST00000580861	KRTAP19-3	Q7Z4W3	81 aa		3.22	□□□□□ -1.89
LINC00511-210	ENST00000580861	NDUFAF8	A1L188	74 aa		3.21	□□□□□ -1.9
LINC00511-210	ENST00000580861	KRTAP20-1	Q3LI63	56 aa		3.21	□□□□□ -1.9
LINC00511-210	ENST00000580861	SPRR5	A0A1B0GTR4	108 aa		3.2	□□□□□ -1.9
LINC00511-210	ENST00000580861	SPRR2D	P22532	72 aa		3.2	□□□□□ -1.9
LINC00511-210	ENST00000580861	KRTAP2-3	P0C7H8	128 aa		3.19	□□□□□ -1.9
LINC00511-210	ENST00000580861	KRTAP2-4	Q9BYR9	128 aa		3.19	□□□□□ -1.9
LINC00511-210	ENST00000580861	MT1L	Q93083	61 aa		3.18	□□□□□ -1.9
LINC00511-210	ENST00000580861	MT1G	P13640	62 aa		3.16	□□□□□ -1.9
LINC00511-210	ENST00000580861	KRTAP19-4	Q3LI73	84 aa		3.15	□□□□□ -1.91
LINC00511-210	ENST00000580861	MT1M	Q8N339	61 aa		3.12	□□□□□ -1.91
LINC00511-210	ENST00000580861	KRTAP2-2	Q9BYT5	123 aa		3.11	□□□□□ -1.91
LINC00511-210	ENST00000580861	KRTAP2-1	Q9BYU5	128 aa		3.11	□□□□□ -1.91
LINC00511-210	ENST00000580861		H3BS24	57 aa		3.09	□□□□□ -1.91
LINC00511-210	ENST00000580861	DST	Q03001	7570 aa	Known RBP	3.05	□□□□□ -1.92
LINC00511-210	ENST00000580861	KRTAP4-3	Q9BYR4	195 aa		3.05	□□□□□ -1.92
LINC00511-210	ENST00000580861	LCE3C	Q5T5A8	94 aa		3.04	□□□□□ -1.92
LINC00511-210	ENST00000580861		A0A0A0MQY5	61 aa		2.98	□□□□□ -1.93
LINC00511-210	ENST00000580861	KRTAP5-4	Q6L8H1	288 aa		2.9	□□□□□ -1.95
LINC00511-210	ENST00000580861	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.89	□□□□□ -1.95
LINC00511-210	ENST00000580861	KRTAP9-6	A8MVA2	160 aa		2.82	□□□□□ -1.96
LINC00511-210	ENST00000580861	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.82	□□□□□ -1.96
LINC00511-210	ENST00000580861	HMCN1	Q96RW7	5635 aa		2.79	□□□□□ -1.96
LINC00511-210	ENST00000580861	MT4	P47944	62 aa		2.78	□□□□□ -1.96
LINC00511-210	ENST00000580861	INE1	O15225	51 aa		2.75	□□□□□ -1.97
LINC00511-210	ENST00000580861	GPR98	Q8WXG9	6306 aa		2.74	□□□□□ -1.97
LINC00511-210	ENST00000580861	MT1A	P04731	61 aa		2.7	□□□□□ -1.98
LINC00511-210	ENST00000580861	SYNE1	Q8NF91	8797 aa	Known RBP	2.69	□□□□□ -1.98
LINC00511-210	ENST00000580861	KRTAP20-2	Q3LI61	65 aa		2.69	□□□□□ -1.98
LINC00511-210	ENST00000580861	KRTAP6-1	Q3LI64	71 aa		2.69	□□□□□ -1.98
LINC00511-210	ENST00000580861	KRTAP12-4	P60329	112 aa		2.68	□□□□□ -1.98
LINC00511-210	ENST00000580861	KRTAP5-11	Q6L8G4	156 aa		2.66	□□□□□ -1.98
LINC00511-210	ENST00000580861	AHNAK2	Q8IVF2	5795 aa		2.59	□□□□□ -2
LINC00511-210	ENST00000580861	KRTAP5-2	Q701N4	177 aa		2.58	□□□□□ -2
LINC00511-210	ENST00000580861	KRTAP5-10	Q6L8G5	202 aa		2.56	□□□□□ -2
LINC00511-210	ENST00000580861	KRTAP6-2	Q3LI66	62 aa		2.52	□□□□□ -2.01
LINC00511-210	ENST00000580861	MT3	P25713	68 aa		2.44	□□□□□ -2.02
LINC00511-210	ENST00000580861	KRTAP5-1	Q6L8H4	278 aa		2.44	□□□□□ -2.02
LINC00511-210	ENST00000580861	KRTAP5-7	Q6L8G8	165 aa		2.42	□□□□□ -2.02
LINC00511-210	ENST00000580861	KRTAP4-4	Q9BYR3	166 aa		2.4	□□□□□ -2.03
LINC00511-210	ENST00000580861	KRTAP5-8	O75690	187 aa		2.35	□□□□□ -2.03
LINC00511-210	ENST00000580861	LCE3D	Q9BYE3	92 aa		2.32	□□□□□ -2.04
LINC00511-210	ENST00000580861	OBSCN	Q5VST9	7968 aa		2.3	□□□□□ -2.04
LINC00511-210	ENST00000580861	LCE3E	Q5T5B0	92 aa		2.28	□□□□□ -2.04
LINC00511-210	ENST00000580861	LCE1E	Q5T753	118 aa		2.24	□□□□□ -2.05
LINC00511-210	ENST00000580861	MUC5AC	P98088	5654 aa		2.19	□□□□□ -2.06
LINC00511-210	ENST00000580861	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.12	□□□□□ -2.07
LINC00511-210	ENST00000580861	AHNAK	Q09666	5890 aa	Known RBP	2.1	□□□□□ -2.07
LINC00511-210	ENST00000580861	LCE1C	Q5T751	118 aa		2.07	□□□□□ -2.08
LINC00511-210	ENST00000580861	LCE1B	Q5T7P3	118 aa		2.07	□□□□□ -2.08
LINC00511-210	ENST00000580861	PRM1	P04553	51 aa		2.02	□□□□□ -2.09
LINC00511-210	ENST00000580861	KRTAP21-2	Q3LI59	83 aa		1.79	□□□□□ -2.12
LINC00511-210	ENST00000580861	LCE1F	Q5T754	118 aa		1.75	□□□□□ -2.13
LINC00511-210	ENST00000580861	PHGR1	C9JFL3	82 aa		1.6	□□□□□ -2.15
LINC00511-210	ENST00000580861	MUC19	Q7Z5P9	8384 aa		1.4	□□□□□ -2.18
LINC00511-210	ENST00000580861	KRTAP21-1	Q3LI58	79 aa		1.27	□□□□□ -2.21
LINC00511-210	ENST00000580861	MUC16	Q8WXI7	14507 aa		1.01	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms