RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
GGA3-209ENST00000580646 INE1O15225 51 aa3.96□□□□□ -1.78
GGA3-209ENST00000580646 SPRR2EP22531 72 aa3.96□□□□□ -1.78
GGA3-209ENST00000580646 SPRR2BP35325 72 aa3.96□□□□□ -1.78
GGA3-209ENST00000580646 SPRR2AP35326 72 aa3.96□□□□□ -1.78
GGA3-209ENST00000580646 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
GGA3-209ENST00000580646 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
GGA3-209ENST00000580646 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
GGA3-209ENST00000580646 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
GGA3-209ENST00000580646 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
GGA3-209ENST00000580646 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
GGA3-209ENST00000580646 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
GGA3-209ENST00000580646 SPRR2DP22532 72 aa3.82□□□□□ -1.8
GGA3-209ENST00000580646 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
GGA3-209ENST00000580646 TNP1P09430 55 aa3.79□□□□□ -1.8
GGA3-209ENST00000580646 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
GGA3-209ENST00000580646 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
GGA3-209ENST00000580646 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
GGA3-209ENST00000580646 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
GGA3-209ENST00000580646 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
GGA3-209ENST00000580646 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
GGA3-209ENST00000580646 MT1EP04732 61 aa3.65□□□□□ -1.83
GGA3-209ENST00000580646 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
GGA3-209ENST00000580646 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
GGA3-209ENST00000580646 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
GGA3-209ENST00000580646 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
GGA3-209ENST00000580646 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
GGA3-209ENST00000580646 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
GGA3-209ENST00000580646 MT1GP13640 62 aa3.54□□□□□ -1.84
GGA3-209ENST00000580646 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
GGA3-209ENST00000580646 MT1LQ93083 61 aa3.53□□□□□ -1.84
GGA3-209ENST00000580646 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
GGA3-209ENST00000580646 MT1MQ8N339 61 aa3.46□□□□□ -1.86
GGA3-209ENST00000580646 MT4P47944 62 aa3.43□□□□□ -1.86
GGA3-209ENST00000580646 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
GGA3-209ENST00000580646 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
GGA3-209ENST00000580646 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
GGA3-209ENST00000580646 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
GGA3-209ENST00000580646 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
GGA3-209ENST00000580646 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
GGA3-209ENST00000580646 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
GGA3-209ENST00000580646 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
GGA3-209ENST00000580646 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
GGA3-209ENST00000580646 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
GGA3-209ENST00000580646 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
GGA3-209ENST00000580646 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
GGA3-209ENST00000580646 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
GGA3-209ENST00000580646 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
GGA3-209ENST00000580646 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
GGA3-209ENST00000580646 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
GGA3-209ENST00000580646 MT1AP04731 61 aa3.02□□□□□ -1.93
GGA3-209ENST00000580646 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
GGA3-209ENST00000580646 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
GGA3-209ENST00000580646 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
GGA3-209ENST00000580646 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
GGA3-209ENST00000580646 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
GGA3-209ENST00000580646 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
GGA3-209ENST00000580646 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
GGA3-209ENST00000580646 MT3P25713 68 aa2.75□□□□□ -1.97
GGA3-209ENST00000580646 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
GGA3-209ENST00000580646 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
GGA3-209ENST00000580646 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
GGA3-209ENST00000580646 PRM1P04553 51 aa2.41□□□□□ -2.02
GGA3-209ENST00000580646 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
GGA3-209ENST00000580646 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
GGA3-209ENST00000580646 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
GGA3-209ENST00000580646 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
GGA3-209ENST00000580646 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
GGA3-209ENST00000580646 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
GGA3-209ENST00000580646 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
GGA3-209ENST00000580646 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
GGA3-209ENST00000580646 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
GGA3-209ENST00000580646 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
GGA3-209ENST00000580646 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
GGA3-209ENST00000580646 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
GGA3-209ENST00000580646 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
GGA3-209ENST00000580646 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
GGA3-209ENST00000580646 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 82.9 ms