RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 KRTAP19-7Q3SYF9 63 aa6.35□□□□□ -1.39
TMCO1-207ENST00000580248 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
TMCO1-207ENST00000580248 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
TMCO1-207ENST00000580248 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
TMCO1-207ENST00000580248 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
TMCO1-207ENST00000580248 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
TMCO1-207ENST00000580248 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
TMCO1-207ENST00000580248 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
TMCO1-207ENST00000580248 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
TMCO1-207ENST00000580248 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
TMCO1-207ENST00000580248 MT1EP04732 61 aa6.21□□□□□ -1.42
TMCO1-207ENST00000580248 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
TMCO1-207ENST00000580248 MT1LQ93083 61 aa6.16□□□□□ -1.42
TMCO1-207ENST00000580248 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
TMCO1-207ENST00000580248 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
TMCO1-207ENST00000580248 SPRR2EP22531 72 aa5.97□□□□□ -1.45
TMCO1-207ENST00000580248 SPRR2BP35325 72 aa5.97□□□□□ -1.45
TMCO1-207ENST00000580248 SPRR2AP35326 72 aa5.97□□□□□ -1.45
TMCO1-207ENST00000580248 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
TMCO1-207ENST00000580248 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
TMCO1-207ENST00000580248 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
TMCO1-207ENST00000580248 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.45
TMCO1-207ENST00000580248 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
TMCO1-207ENST00000580248 MT1GP13640 62 aa5.91□□□□□ -1.46
TMCO1-207ENST00000580248 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
TMCO1-207ENST00000580248 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.47
TMCO1-207ENST00000580248 NEBP20929 6669 aa5.85□□□□□ -1.47
TMCO1-207ENST00000580248 MT1MQ8N339 61 aa5.83□□□□□ -1.48
TMCO1-207ENST00000580248 INE1O15225 51 aa5.79□□□□□ -1.48
TMCO1-207ENST00000580248 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
TMCO1-207ENST00000580248 SPRR2DP22532 72 aa5.77□□□□□ -1.49
TMCO1-207ENST00000580248 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
TMCO1-207ENST00000580248 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
TMCO1-207ENST00000580248 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
TMCO1-207ENST00000580248 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
TMCO1-207ENST00000580248 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
TMCO1-207ENST00000580248 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
TMCO1-207ENST00000580248 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
TMCO1-207ENST00000580248 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
TMCO1-207ENST00000580248 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
TMCO1-207ENST00000580248 MT1AP04731 61 aa5.25□□□□□ -1.57
TMCO1-207ENST00000580248 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
TMCO1-207ENST00000580248 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
TMCO1-207ENST00000580248 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
TMCO1-207ENST00000580248 MT4P47944 62 aa5□□□□□ -1.61
TMCO1-207ENST00000580248 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
TMCO1-207ENST00000580248 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
TMCO1-207ENST00000580248 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
TMCO1-207ENST00000580248 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
TMCO1-207ENST00000580248 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
TMCO1-207ENST00000580248 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
TMCO1-207ENST00000580248 MT3P25713 68 aa4.75□□□□□ -1.65
TMCO1-207ENST00000580248 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
TMCO1-207ENST00000580248 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
TMCO1-207ENST00000580248 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
TMCO1-207ENST00000580248 PRM1P04553 51 aa4.32□□□□□ -1.72
TMCO1-207ENST00000580248 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
TMCO1-207ENST00000580248 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
TMCO1-207ENST00000580248 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
TMCO1-207ENST00000580248 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
TMCO1-207ENST00000580248 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
TMCO1-207ENST00000580248 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
TMCO1-207ENST00000580248 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
TMCO1-207ENST00000580248 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
TMCO1-207ENST00000580248 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
TMCO1-207ENST00000580248 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
TMCO1-207ENST00000580248 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
TMCO1-207ENST00000580248 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
TMCO1-207ENST00000580248 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
TMCO1-207ENST00000580248 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
TMCO1-207ENST00000580248 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
TMCO1-207ENST00000580248 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
TMCO1-207ENST00000580248 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
TMCO1-207ENST00000580248 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
TMCO1-207ENST00000580248 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
TMCO1-207ENST00000580248 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
TMCO1-207ENST00000580248 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 75.5 ms