RNA–Protein interactions for RNA: ENST00000580027.1

LLGL2-215, Transcript of LLGL2, scribble cell polarity complex component, human

TSL 2

Gene LLGL2, Length 1,875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LLGL2-215	ENST00000580027	KRTAP9-7	A8MTY7	169 aa		5.92	□□□□□ -1.46
LLGL2-215	ENST00000580027	INE1	O15225	51 aa		5.92	□□□□□ -1.46
LLGL2-215	ENST00000580027	MUC12	Q9UKN1	5478 aa		5.85	□□□□□ -1.47
LLGL2-215	ENST00000580027	MT1E	P04732	61 aa		5.83	□□□□□ -1.48
LLGL2-215	ENST00000580027	KRTAP19-4	Q3LI73	84 aa		5.82	□□□□□ -1.48
LLGL2-215	ENST00000580027	KRTAP6-3	Q3LI67	103 aa		5.8	□□□□□ -1.48
LLGL2-215	ENST00000580027	MT1L	Q93083	61 aa		5.77	□□□□□ -1.49
LLGL2-215	ENST00000580027	MDN1	Q9NU22	5596 aa		5.75	□□□□□ -1.49
LLGL2-215	ENST00000580027	KRTAP5-9	P26371	169 aa		5.72	□□□□□ -1.49
LLGL2-215	ENST00000580027	KRTAP4-7	Q9BYR0	210 aa		5.68	□□□□□ -1.5
LLGL2-215	ENST00000580027	KRTAP9-6	A8MVA2	160 aa		5.66	□□□□□ -1.5
LLGL2-215	ENST00000580027	SPRR2F	Q96RM1	72 aa		5.65	□□□□□ -1.5
LLGL2-215	ENST00000580027	NEB	P20929	6669 aa		5.64	□□□□□ -1.51
LLGL2-215	ENST00000580027	KRTAP19-3	Q7Z4W3	81 aa		5.51	□□□□□ -1.53
LLGL2-215	ENST00000580027	MT1G	P13640	62 aa		5.49	□□□□□ -1.53
LLGL2-215	ENST00000580027	LCE1A	Q5T7P2	110 aa		5.47	□□□□□ -1.53
LLGL2-215	ENST00000580027	SPRR2E	P22531	72 aa		5.46	□□□□□ -1.54
LLGL2-215	ENST00000580027	SPRR2B	P35325	72 aa		5.46	□□□□□ -1.54
LLGL2-215	ENST00000580027	SPRR2A	P35326	72 aa		5.46	□□□□□ -1.54
LLGL2-215	ENST00000580027	MT1M	Q8N339	61 aa		5.46	□□□□□ -1.54
LLGL2-215	ENST00000580027	KRTAP4-3	Q9BYR4	195 aa		5.41	□□□□□ -1.54
LLGL2-215	ENST00000580027	KRTAP2-3	P0C7H8	128 aa		5.4	□□□□□ -1.55
LLGL2-215	ENST00000580027	KRTAP2-4	Q9BYR9	128 aa		5.4	□□□□□ -1.55
LLGL2-215	ENST00000580027	KRTAP2-1	Q9BYU5	128 aa		5.4	□□□□□ -1.55
LLGL2-215	ENST00000580027	LCE5A	Q5TCM9	118 aa		5.36	□□□□□ -1.55
LLGL2-215	ENST00000580027	LOC100996750	A0A140TA64	210 aa		5.32	□□□□□ -1.56
LLGL2-215	ENST00000580027	DST	Q03001	7570 aa	Known RBP	5.31	□□□□□ -1.56
LLGL2-215	ENST00000580027	SPRR2D	P22532	72 aa		5.26	□□□□□ -1.57
LLGL2-215	ENST00000580027	KRTAP20-1	Q3LI63	56 aa		5.2	□□□□□ -1.58
LLGL2-215	ENST00000580027	LCE3B	Q5TA77	95 aa		5.1	□□□□□ -1.59
LLGL2-215	ENST00000580027	KRTAP2-2	Q9BYT5	123 aa		5.02	□□□□□ -1.61
LLGL2-215	ENST00000580027	MT1A	P04731	61 aa		4.89	□□□□□ -1.63
LLGL2-215	ENST00000580027	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.88	□□□□□ -1.63
LLGL2-215	ENST00000580027	KRTAP6-1	Q3LI64	71 aa		4.87	□□□□□ -1.63
LLGL2-215	ENST00000580027	KRTAP4-9	Q9BYQ8	210 aa		4.71	□□□□□ -1.66
LLGL2-215	ENST00000580027	KRTAP12-4	P60329	112 aa		4.67	□□□□□ -1.66
LLGL2-215	ENST00000580027	KRTAP5-4	Q6L8H1	288 aa		4.67	□□□□□ -1.66
LLGL2-215	ENST00000580027	HMCN1	Q96RW7	5635 aa		4.66	□□□□□ -1.66
LLGL2-215	ENST00000580027	LCE4A	Q5TA78	99 aa		4.64	□□□□□ -1.67
LLGL2-215	ENST00000580027	MT4	P47944	62 aa		4.62	□□□□□ -1.67
LLGL2-215	ENST00000580027	KRTAP9-4	Q9BYQ2	154 aa		4.62	□□□□□ -1.67
LLGL2-215	ENST00000580027	SYNE1	Q8NF91	8797 aa	Known RBP	4.61	□□□□□ -1.67
LLGL2-215	ENST00000580027	LCE1D	Q5T752	114 aa		4.61	□□□□□ -1.67
LLGL2-215	ENST00000580027	KRTAP4-6	Q9BYQ5	205 aa		4.56	□□□□□ -1.68
LLGL2-215	ENST00000580027	LCE3D	Q9BYE3	92 aa		4.53	□□□□□ -1.68
LLGL2-215	ENST00000580027	LCE3E	Q5T5B0	92 aa		4.45	□□□□□ -1.7
LLGL2-215	ENST00000580027	KRTAP6-2	Q3LI66	62 aa		4.41	□□□□□ -1.7
LLGL2-215	ENST00000580027	MT3	P25713	68 aa		4.41	□□□□□ -1.7
LLGL2-215	ENST00000580027	KRTAP20-2	Q3LI61	65 aa		4.39	□□□□□ -1.71
LLGL2-215	ENST00000580027	AHNAK2	Q8IVF2	5795 aa		4.32	□□□□□ -1.72
LLGL2-215	ENST00000580027	GPR98	Q8WXG9	6306 aa		4.28	□□□□□ -1.72
LLGL2-215	ENST00000580027	KRTAP5-3	Q6L8H2	238 aa		4.26	□□□□□ -1.73
LLGL2-215	ENST00000580027	OBSCN	Q5VST9	7968 aa		4.17	□□□□□ -1.74
LLGL2-215	ENST00000580027	KRTAP5-2	Q701N4	177 aa		4.16	□□□□□ -1.74
LLGL2-215	ENST00000580027	PRM1	P04553	51 aa		4.09	□□□□□ -1.76
LLGL2-215	ENST00000580027	KRTAP5-10	Q6L8G5	202 aa		4.08	□□□□□ -1.76
LLGL2-215	ENST00000580027	KRTAP4-11	Q9BYQ6	195 aa		3.92	□□□□□ -1.78
LLGL2-215	ENST00000580027	KRTAP5-7	Q6L8G8	165 aa		3.84	□□□□□ -1.8
LLGL2-215	ENST00000580027	KRTAP5-8	O75690	187 aa		3.79	□□□□□ -1.8
LLGL2-215	ENST00000580027	LCE1E	Q5T753	118 aa		3.71	□□□□□ -1.82
LLGL2-215	ENST00000580027	KRTAP4-12	Q9BQ66	201 aa		3.7	□□□□□ -1.82
LLGL2-215	ENST00000580027	MUC5AC	P98088	5654 aa		3.69	□□□□□ -1.82
LLGL2-215	ENST00000580027	KRTAP5-1	Q6L8H4	278 aa		3.69	□□□□□ -1.82
LLGL2-215	ENST00000580027	KRTAP9-9	Q9BYP9	154 aa		3.62	□□□□□ -1.83
LLGL2-215	ENST00000580027	LCE1B	Q5T7P3	118 aa		3.54	□□□□□ -1.84
LLGL2-215	ENST00000580027	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.53	□□□□□ -1.84
LLGL2-215	ENST00000580027	LCE1C	Q5T751	118 aa		3.47	□□□□□ -1.85
LLGL2-215	ENST00000580027	KRTAP4-2	Q9BYR5	136 aa		3.47	□□□□□ -1.85
LLGL2-215	ENST00000580027	AHNAK	Q09666	5890 aa	Known RBP	3.43	□□□□□ -1.86
LLGL2-215	ENST00000580027	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.28	□□□□□ -1.88
LLGL2-215	ENST00000580027	KRTAP21-2	Q3LI59	83 aa		3.18	□□□□□ -1.9
LLGL2-215	ENST00000580027	KRTAP5-11	Q6L8G4	156 aa		3.02	□□□□□ -1.93
LLGL2-215	ENST00000580027	KRTAP4-4	Q9BYR3	166 aa		2.82	□□□□□ -1.96
LLGL2-215	ENST00000580027	LCE1F	Q5T754	118 aa		2.8	□□□□□ -1.96
LLGL2-215	ENST00000580027	KRTAP21-1	Q3LI58	79 aa		2.65	□□□□□ -1.98
LLGL2-215	ENST00000580027	PHGR1	C9JFL3	82 aa		2.61	□□□□□ -1.99
LLGL2-215	ENST00000580027	MUC19	Q7Z5P9	8384 aa		2.52	□□□□□ -2.01
LLGL2-215	ENST00000580027	MUC16	Q8WXI7	14507 aa		1.73	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms