RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MRPL34Q9BQ48 92 aaKnown RBP0.96□□□□□ -2.26
KPNB1-208ENST00000580019 MT2AP02795 61 aa0.95□□□□□ -2.26
KPNB1-208ENST00000580019 MT1FP04733 61 aa0.95□□□□□ -2.26
KPNB1-208ENST00000580019 SPRR2DP22532 72 aa0.95□□□□□ -2.26
KPNB1-208ENST00000580019 ABRACLQ9P1F3 81 aa0.95□□□□□ -2.26
KPNB1-208ENST00000580019 SPINK4O60575 86 aa0.94□□□□□ -2.26
KPNB1-208ENST00000580019 KCNQ1DNQ9H478 68 aa0.93□□□□□ -2.26
KPNB1-208ENST00000580019 A0A096LNI7 61 aa0.92□□□□□ -2.26
KPNB1-208ENST00000580019 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
KPNB1-208ENST00000580019 ARHGAP5-AS1Q96IT6 56 aa0.91□□□□□ -2.26
KPNB1-208ENST00000580019 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
KPNB1-208ENST00000580019 ETDCA0A1B0GVM5 59 aa0.9□□□□□ -2.27
KPNB1-208ENST00000580019 SPRR1AP35321 89 aa0.89□□□□□ -2.27
KPNB1-208ENST00000580019 SERF2P84101 59 aa0.89□□□□□ -2.27
KPNB1-208ENST00000580019 SPRR1BP22528 89 aa0.88□□□□□ -2.27
KPNB1-208ENST00000580019 CLPSL2Q6UWE3 100 aa0.88□□□□□ -2.27
KPNB1-208ENST00000580019 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
KPNB1-208ENST00000580019 CDKN2A-AS1Q9UH64 79 aa0.88□□□□□ -2.27
KPNB1-208ENST00000580019 K7EMI3 77 aa0.87□□□□□ -2.27
KPNB1-208ENST00000580019 FCER1GP30273 86 aa0.87□□□□□ -2.27
KPNB1-208ENST00000580019 NMES1Q9C002 83 aa0.87□□□□□ -2.27
KPNB1-208ENST00000580019 FXYD6Q9H0Q3 95 aa0.87□□□□□ -2.27
KPNB1-208ENST00000580019 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
KPNB1-208ENST00000580019 MT4P47944 62 aa0.86□□□□□ -2.27
KPNB1-208ENST00000580019 SNRPGP15A8MWD9 76 aa0.85□□□□□ -2.27
KPNB1-208ENST00000580019 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
KPNB1-208ENST00000580019 H1FX-AS1Q4G0G2 97 aa0.84□□□□□ -2.27
KPNB1-208ENST00000580019 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
KPNB1-208ENST00000580019 LINC00158P58513 81 aa0.83□□□□□ -2.28
KPNB1-208ENST00000580019 WFDC13Q8IUB5 93 aa0.82□□□□□ -2.28
KPNB1-208ENST00000580019 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
KPNB1-208ENST00000580019 SPINK1P00995 79 aa0.81□□□□□ -2.28
KPNB1-208ENST00000580019 CRIP1P50238 77 aa0.8□□□□□ -2.28
KPNB1-208ENST00000580019 RPS29P62273 56 aaKnown RBP0.8□□□□□ -2.28
KPNB1-208ENST00000580019 MT1BP07438 61 aa0.79□□□□□ -2.28
KPNB1-208ENST00000580019 H0YAA0 97 aa0.78□□□□□ -2.28
KPNB1-208ENST00000580019 IAPPP10997 89 aa0.78□□□□□ -2.28
KPNB1-208ENST00000580019 IGIPA6NJ69 53 aa0.77□□□□□ -2.29
KPNB1-208ENST00000580019 PLNP26678 52 aa0.77□□□□□ -2.29
KPNB1-208ENST00000580019 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
KPNB1-208ENST00000580019 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
KPNB1-208ENST00000580019 M0QY20 66 aa0.75□□□□□ -2.29
KPNB1-208ENST00000580019 PRLHP81277 87 aa0.75□□□□□ -2.29
KPNB1-208ENST00000580019 H0YGX0 51 aa0.74□□□□□ -2.29
KPNB1-208ENST00000580019 NDUFA1O15239 70 aa0.74□□□□□ -2.29
KPNB1-208ENST00000580019 KRTAP19-8Q3LI54 63 aa0.74□□□□□ -2.29
KPNB1-208ENST00000580019 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
KPNB1-208ENST00000580019 TMEM167BQ9NRX6 74 aa0.74□□□□□ -2.29
KPNB1-208ENST00000580019 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
KPNB1-208ENST00000580019 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
KPNB1-208ENST00000580019 SPRR2GQ9BYE4 73 aa0.7□□□□□ -2.3
KPNB1-208ENST00000580019 POLR2KP53803 58 aaKnown RBP0.69□□□□□ -2.3
KPNB1-208ENST00000580019 RPL39LQ96EH5 51 aaKnown RBP0.69□□□□□ -2.3
KPNB1-208ENST00000580019 MT1XP80297 61 aa0.67□□□□□ -2.3
KPNB1-208ENST00000580019 TOMM5Q8N4H5 51 aa0.67□□□□□ -2.3
KPNB1-208ENST00000580019 SMIM27A0A1W2PRY6 76 aa0.66□□□□□ -2.3
KPNB1-208ENST00000580019 LINC00308Q8TCZ7 52 aa0.66□□□□□ -2.3
KPNB1-208ENST00000580019 LINC01546A6NGU7 62 aa0.65□□□□□ -2.31
KPNB1-208ENST00000580019 RPL39P62891 51 aaKnown RBP0.65□□□□□ -2.31
KPNB1-208ENST00000580019 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.31
KPNB1-208ENST00000580019 MT1EP04732 61 aa0.62□□□□□ -2.31
KPNB1-208ENST00000580019 MT1GP13640 62 aa0.61□□□□□ -2.31
KPNB1-208ENST00000580019 KRTAP19-7Q3SYF9 63 aa0.61□□□□□ -2.31
KPNB1-208ENST00000580019 MT1MQ8N339 61 aa0.6□□□□□ -2.31
KPNB1-208ENST00000580019 SMIM2Q9BVW6 85 aa0.6□□□□□ -2.31
KPNB1-208ENST00000580019 S4R3F8 94 aa0.6□□□□□ -2.31
KPNB1-208ENST00000580019 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
KPNB1-208ENST00000580019 IGLV5-48A0A075B6I7 105 aa0.58□□□□□ -2.32
KPNB1-208ENST00000580019 PRM1P04553 51 aa0.55□□□□□ -2.32
KPNB1-208ENST00000580019 MT1LQ93083 61 aa0.54□□□□□ -2.32
KPNB1-208ENST00000580019 KRTAP19-5Q3LI72 72 aa0.52□□□□□ -2.33
KPNB1-208ENST00000580019 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
KPNB1-208ENST00000580019 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
KPNB1-208ENST00000580019 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
KPNB1-208ENST00000580019 MT1AP04731 61 aa0.45□□□□□ -2.34
KPNB1-208ENST00000580019 MMP24-AS1A0A0U1RRL7 71 aa0.44□□□□□ -2.34
KPNB1-208ENST00000580019 M0QZ58 72 aa0.44□□□□□ -2.34
KPNB1-208ENST00000580019 TNP1P09430 55 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 108.5 ms