RNA–Protein interactions for RNA: ENST00000579324.5

NUP85-211, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 2,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-211ENST00000579324 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
NUP85-211ENST00000579324 NEBP20929 6669 aa3.97□□□□□ -1.77
NUP85-211ENST00000579324 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
NUP85-211ENST00000579324 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
NUP85-211ENST00000579324 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
NUP85-211ENST00000579324 MT1EP04732 61 aa3.87□□□□□ -1.79
NUP85-211ENST00000579324 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
NUP85-211ENST00000579324 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
NUP85-211ENST00000579324 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
NUP85-211ENST00000579324 MT1LQ93083 61 aa3.85□□□□□ -1.79
NUP85-211ENST00000579324 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
NUP85-211ENST00000579324 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
NUP85-211ENST00000579324 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
NUP85-211ENST00000579324 SPRR2EP22531 72 aa3.76□□□□□ -1.81
NUP85-211ENST00000579324 SPRR2BP35325 72 aa3.76□□□□□ -1.81
NUP85-211ENST00000579324 SPRR2AP35326 72 aa3.76□□□□□ -1.81
NUP85-211ENST00000579324 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
NUP85-211ENST00000579324 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
NUP85-211ENST00000579324 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
NUP85-211ENST00000579324 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
NUP85-211ENST00000579324 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
NUP85-211ENST00000579324 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
NUP85-211ENST00000579324 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
NUP85-211ENST00000579324 MT1GP13640 62 aa3.63□□□□□ -1.83
NUP85-211ENST00000579324 SPRR2DP22532 72 aa3.63□□□□□ -1.83
NUP85-211ENST00000579324 MT1MQ8N339 61 aa3.63□□□□□ -1.83
NUP85-211ENST00000579324 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
NUP85-211ENST00000579324 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
NUP85-211ENST00000579324 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
NUP85-211ENST00000579324 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
NUP85-211ENST00000579324 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
NUP85-211ENST00000579324 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
NUP85-211ENST00000579324 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
NUP85-211ENST00000579324 MT1AP04731 61 aa3.25□□□□□ -1.89
NUP85-211ENST00000579324 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
NUP85-211ENST00000579324 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
NUP85-211ENST00000579324 MT4P47944 62 aa3.2□□□□□ -1.9
NUP85-211ENST00000579324 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
NUP85-211ENST00000579324 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
NUP85-211ENST00000579324 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
NUP85-211ENST00000579324 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
NUP85-211ENST00000579324 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
NUP85-211ENST00000579324 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
NUP85-211ENST00000579324 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
NUP85-211ENST00000579324 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
NUP85-211ENST00000579324 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
NUP85-211ENST00000579324 MT3P25713 68 aa3.02□□□□□ -1.93
NUP85-211ENST00000579324 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
NUP85-211ENST00000579324 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
NUP85-211ENST00000579324 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
NUP85-211ENST00000579324 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
NUP85-211ENST00000579324 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
NUP85-211ENST00000579324 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
NUP85-211ENST00000579324 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
NUP85-211ENST00000579324 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
NUP85-211ENST00000579324 PRM1P04553 51 aa2.85□□□□□ -1.95
NUP85-211ENST00000579324 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
NUP85-211ENST00000579324 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
NUP85-211ENST00000579324 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
NUP85-211ENST00000579324 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
NUP85-211ENST00000579324 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
NUP85-211ENST00000579324 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
NUP85-211ENST00000579324 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
NUP85-211ENST00000579324 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
NUP85-211ENST00000579324 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
NUP85-211ENST00000579324 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
NUP85-211ENST00000579324 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
NUP85-211ENST00000579324 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
NUP85-211ENST00000579324 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
NUP85-211ENST00000579324 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
NUP85-211ENST00000579324 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
NUP85-211ENST00000579324 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
NUP85-211ENST00000579324 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
NUP85-211ENST00000579324 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
NUP85-211ENST00000579324 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
NUP85-211ENST00000579324 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
NUP85-211ENST00000579324 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 85.4 ms