RNA–Protein interactions for RNA: ENST00000579298.5

NUP85-210, Transcript of nucleoporin 85, humanhuman

TSL 5 BASIC

Gene NUP85, Length 1,890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-210ENST00000579298 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
NUP85-210ENST00000579298 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
NUP85-210ENST00000579298 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
NUP85-210ENST00000579298 MT1LQ93083 61 aa3.56□□□□□ -1.84
NUP85-210ENST00000579298 MT1EP04732 61 aa3.56□□□□□ -1.84
NUP85-210ENST00000579298 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
NUP85-210ENST00000579298 KMT2DO14686 5537 aa3.54□□□□□ -1.84
NUP85-210ENST00000579298 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
NUP85-210ENST00000579298 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
NUP85-210ENST00000579298 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
NUP85-210ENST00000579298 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
NUP85-210ENST00000579298 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
NUP85-210ENST00000579298 MT1MQ8N339 61 aa3.31□□□□□ -1.88
NUP85-210ENST00000579298 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
NUP85-210ENST00000579298 MT1GP13640 62 aa3.3□□□□□ -1.88
NUP85-210ENST00000579298 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
NUP85-210ENST00000579298 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
NUP85-210ENST00000579298 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
NUP85-210ENST00000579298 NEBP20929 6669 aa3.25□□□□□ -1.89
NUP85-210ENST00000579298 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
NUP85-210ENST00000579298 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
NUP85-210ENST00000579298 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
NUP85-210ENST00000579298 SPRR2EP22531 72 aa3.23□□□□□ -1.89
NUP85-210ENST00000579298 SPRR2BP35325 72 aa3.23□□□□□ -1.89
NUP85-210ENST00000579298 SPRR2AP35326 72 aa3.23□□□□□ -1.89
NUP85-210ENST00000579298 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
NUP85-210ENST00000579298 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
NUP85-210ENST00000579298 SPRR2DP22532 72 aa3.11□□□□□ -1.91
NUP85-210ENST00000579298 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
NUP85-210ENST00000579298 MT1AP04731 61 aa3.09□□□□□ -1.92
NUP85-210ENST00000579298 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.92
NUP85-210ENST00000579298 LCE3BQ5TA77 95 aa3.02□□□□□ -1.93
NUP85-210ENST00000579298 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
NUP85-210ENST00000579298 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
NUP85-210ENST00000579298 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
NUP85-210ENST00000579298 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
NUP85-210ENST00000579298 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
NUP85-210ENST00000579298 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
NUP85-210ENST00000579298 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
NUP85-210ENST00000579298 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
NUP85-210ENST00000579298 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
NUP85-210ENST00000579298 PRM1P04553 51 aa2.75□□□□□ -1.97
NUP85-210ENST00000579298 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
NUP85-210ENST00000579298 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
NUP85-210ENST00000579298 MT4P47944 62 aa2.73□□□□□ -1.97
NUP85-210ENST00000579298 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
NUP85-210ENST00000579298 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
NUP85-210ENST00000579298 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
NUP85-210ENST00000579298 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
NUP85-210ENST00000579298 MT3P25713 68 aa2.67□□□□□ -1.98
NUP85-210ENST00000579298 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
NUP85-210ENST00000579298 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
NUP85-210ENST00000579298 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
NUP85-210ENST00000579298 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
NUP85-210ENST00000579298 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
NUP85-210ENST00000579298 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
NUP85-210ENST00000579298 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
NUP85-210ENST00000579298 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
NUP85-210ENST00000579298 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
NUP85-210ENST00000579298 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
NUP85-210ENST00000579298 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
NUP85-210ENST00000579298 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
NUP85-210ENST00000579298 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
NUP85-210ENST00000579298 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
NUP85-210ENST00000579298 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
NUP85-210ENST00000579298 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
NUP85-210ENST00000579298 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
NUP85-210ENST00000579298 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
NUP85-210ENST00000579298 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
NUP85-210ENST00000579298 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
NUP85-210ENST00000579298 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NUP85-210ENST00000579298 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NUP85-210ENST00000579298 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
NUP85-210ENST00000579298 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
NUP85-210ENST00000579298 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
NUP85-210ENST00000579298 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
NUP85-210ENST00000579298 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 83.4 ms