RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
CDK5RAP3-208ENST00000578525 KMT2DO14686 5537 aa3.17□□□□□ -1.9
CDK5RAP3-208ENST00000578525 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
CDK5RAP3-208ENST00000578525 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
CDK5RAP3-208ENST00000578525 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
CDK5RAP3-208ENST00000578525 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
CDK5RAP3-208ENST00000578525 KRTAP19-3Q7Z4W3 81 aa3.11□□□□□ -1.91
CDK5RAP3-208ENST00000578525 MT1GP13640 62 aa3.09□□□□□ -1.91
CDK5RAP3-208ENST00000578525 MT1MQ8N339 61 aa3.09□□□□□ -1.91
CDK5RAP3-208ENST00000578525 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
CDK5RAP3-208ENST00000578525 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
CDK5RAP3-208ENST00000578525 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.92
CDK5RAP3-208ENST00000578525 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
CDK5RAP3-208ENST00000578525 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
CDK5RAP3-208ENST00000578525 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
CDK5RAP3-208ENST00000578525 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
CDK5RAP3-208ENST00000578525 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
CDK5RAP3-208ENST00000578525 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
CDK5RAP3-208ENST00000578525 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.95
CDK5RAP3-208ENST00000578525 SPRR2EP22531 72 aa2.8□□□□□ -1.96
CDK5RAP3-208ENST00000578525 SPRR2BP35325 72 aa2.8□□□□□ -1.96
CDK5RAP3-208ENST00000578525 SPRR2AP35326 72 aa2.8□□□□□ -1.96
CDK5RAP3-208ENST00000578525 MT1AP04731 61 aa2.79□□□□□ -1.96
CDK5RAP3-208ENST00000578525 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
CDK5RAP3-208ENST00000578525 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CDK5RAP3-208ENST00000578525 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
CDK5RAP3-208ENST00000578525 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
CDK5RAP3-208ENST00000578525 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
CDK5RAP3-208ENST00000578525 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
CDK5RAP3-208ENST00000578525 NEBP20929 6669 aa2.69□□□□□ -1.98
CDK5RAP3-208ENST00000578525 SPRR2DP22532 72 aa2.69□□□□□ -1.98
CDK5RAP3-208ENST00000578525 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
CDK5RAP3-208ENST00000578525 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
CDK5RAP3-208ENST00000578525 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
CDK5RAP3-208ENST00000578525 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
CDK5RAP3-208ENST00000578525 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
CDK5RAP3-208ENST00000578525 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CDK5RAP3-208ENST00000578525 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
CDK5RAP3-208ENST00000578525 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
CDK5RAP3-208ENST00000578525 MT3P25713 68 aa2.5□□□□□ -2.01
CDK5RAP3-208ENST00000578525 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
CDK5RAP3-208ENST00000578525 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
CDK5RAP3-208ENST00000578525 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
CDK5RAP3-208ENST00000578525 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
CDK5RAP3-208ENST00000578525 PRM1P04553 51 aa2.39□□□□□ -2.03
CDK5RAP3-208ENST00000578525 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
CDK5RAP3-208ENST00000578525 KRTAP4-6Q9BYQ5 205 aa2.33□□□□□ -2.04
CDK5RAP3-208ENST00000578525 MT4P47944 62 aa2.31□□□□□ -2.04
CDK5RAP3-208ENST00000578525 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
CDK5RAP3-208ENST00000578525 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
CDK5RAP3-208ENST00000578525 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
CDK5RAP3-208ENST00000578525 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
CDK5RAP3-208ENST00000578525 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
CDK5RAP3-208ENST00000578525 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
CDK5RAP3-208ENST00000578525 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
CDK5RAP3-208ENST00000578525 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
CDK5RAP3-208ENST00000578525 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
CDK5RAP3-208ENST00000578525 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CDK5RAP3-208ENST00000578525 MUC5ACP98088 5654 aa2□□□□□ -2.09
CDK5RAP3-208ENST00000578525 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
CDK5RAP3-208ENST00000578525 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
CDK5RAP3-208ENST00000578525 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
CDK5RAP3-208ENST00000578525 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
CDK5RAP3-208ENST00000578525 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
CDK5RAP3-208ENST00000578525 KRTAP9-9Q9BYP9 154 aa1.9□□□□□ -2.11
CDK5RAP3-208ENST00000578525 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
CDK5RAP3-208ENST00000578525 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CDK5RAP3-208ENST00000578525 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
CDK5RAP3-208ENST00000578525 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.12
CDK5RAP3-208ENST00000578525 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
CDK5RAP3-208ENST00000578525 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CDK5RAP3-208ENST00000578525 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CDK5RAP3-208ENST00000578525 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CDK5RAP3-208ENST00000578525 LCE1FQ5T754 118 aa1.52□□□□□ -2.17
CDK5RAP3-208ENST00000578525 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CDK5RAP3-208ENST00000578525 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
CDK5RAP3-208ENST00000578525 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
CDK5RAP3-208ENST00000578525 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 215.3 ms