RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
PRKCA-203ENST00000578063 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
PRKCA-203ENST00000578063 KMT2DO14686 5537 aa7.03□□□□□ -1.28
PRKCA-203ENST00000578063 A0A0A0MQY5 61 aa7.03□□□□□ -1.28
PRKCA-203ENST00000578063 KRTAP12-3P60328 96 aa6.96□□□□□ -1.29
PRKCA-203ENST00000578063 MACF1Q9UPN3 7388 aaKnown RBP6.95□□□□□ -1.3
PRKCA-203ENST00000578063 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
PRKCA-203ENST00000578063 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.31
PRKCA-203ENST00000578063 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
PRKCA-203ENST00000578063 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
PRKCA-203ENST00000578063 MT1EP04732 61 aa6.77□□□□□ -1.33
PRKCA-203ENST00000578063 SYNE2Q8WXH0 6885 aaKnown RBP6.76□□□□□ -1.33
PRKCA-203ENST00000578063 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.34
PRKCA-203ENST00000578063 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
PRKCA-203ENST00000578063 MT1LQ93083 61 aa6.62□□□□□ -1.35
PRKCA-203ENST00000578063 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
PRKCA-203ENST00000578063 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.36
PRKCA-203ENST00000578063 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
PRKCA-203ENST00000578063 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
PRKCA-203ENST00000578063 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
PRKCA-203ENST00000578063 MT1GP13640 62 aa6.47□□□□□ -1.37
PRKCA-203ENST00000578063 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
PRKCA-203ENST00000578063 SPRR2EP22531 72 aa6.41□□□□□ -1.38
PRKCA-203ENST00000578063 SPRR2BP35325 72 aa6.41□□□□□ -1.38
PRKCA-203ENST00000578063 SPRR2AP35326 72 aa6.41□□□□□ -1.38
PRKCA-203ENST00000578063 LCE1AQ5T7P2 110 aa6.41□□□□□ -1.38
PRKCA-203ENST00000578063 MDN1Q9NU22 5596 aa6.4□□□□□ -1.38
PRKCA-203ENST00000578063 MT1MQ8N339 61 aa6.38□□□□□ -1.39
PRKCA-203ENST00000578063 NEBP20929 6669 aa6.22□□□□□ -1.41
PRKCA-203ENST00000578063 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
PRKCA-203ENST00000578063 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
PRKCA-203ENST00000578063 SPRR2DP22532 72 aa6.19□□□□□ -1.42
PRKCA-203ENST00000578063 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
PRKCA-203ENST00000578063 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.02□□□□□ -1.45
PRKCA-203ENST00000578063 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
PRKCA-203ENST00000578063 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
PRKCA-203ENST00000578063 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
PRKCA-203ENST00000578063 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
PRKCA-203ENST00000578063 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
PRKCA-203ENST00000578063 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
PRKCA-203ENST00000578063 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
PRKCA-203ENST00000578063 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
PRKCA-203ENST00000578063 MT1AP04731 61 aa5.64□□□□□ -1.51
PRKCA-203ENST00000578063 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
PRKCA-203ENST00000578063 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
PRKCA-203ENST00000578063 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
PRKCA-203ENST00000578063 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
PRKCA-203ENST00000578063 KRTAP5-11Q6L8G4 156 aa5.38□□□□□ -1.55
PRKCA-203ENST00000578063 MT4P47944 62 aa5.37□□□□□ -1.55
PRKCA-203ENST00000578063 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
PRKCA-203ENST00000578063 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
PRKCA-203ENST00000578063 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
PRKCA-203ENST00000578063 MT3P25713 68 aa5.11□□□□□ -1.59
PRKCA-203ENST00000578063 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
PRKCA-203ENST00000578063 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
PRKCA-203ENST00000578063 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
PRKCA-203ENST00000578063 INE1O15225 51 aa4.94□□□□□ -1.62
PRKCA-203ENST00000578063 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
PRKCA-203ENST00000578063 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
PRKCA-203ENST00000578063 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
PRKCA-203ENST00000578063 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
PRKCA-203ENST00000578063 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
PRKCA-203ENST00000578063 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
PRKCA-203ENST00000578063 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
PRKCA-203ENST00000578063 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
PRKCA-203ENST00000578063 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.73
PRKCA-203ENST00000578063 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
PRKCA-203ENST00000578063 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
PRKCA-203ENST00000578063 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
PRKCA-203ENST00000578063 PRM1P04553 51 aa4.07□□□□□ -1.76
PRKCA-203ENST00000578063 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
PRKCA-203ENST00000578063 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
PRKCA-203ENST00000578063 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
PRKCA-203ENST00000578063 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
PRKCA-203ENST00000578063 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
PRKCA-203ENST00000578063 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
PRKCA-203ENST00000578063 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
PRKCA-203ENST00000578063 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms