RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
ABR-218ENST00000572585 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
ABR-218ENST00000572585 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
ABR-218ENST00000572585 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
ABR-218ENST00000572585 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
ABR-218ENST00000572585 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
ABR-218ENST00000572585 MT1LQ93083 61 aa3.87□□□□□ -1.79
ABR-218ENST00000572585 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
ABR-218ENST00000572585 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
ABR-218ENST00000572585 MT1EP04732 61 aa3.8□□□□□ -1.8
ABR-218ENST00000572585 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
ABR-218ENST00000572585 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
ABR-218ENST00000572585 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
ABR-218ENST00000572585 MT1GP13640 62 aa3.7□□□□□ -1.82
ABR-218ENST00000572585 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
ABR-218ENST00000572585 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
ABR-218ENST00000572585 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
ABR-218ENST00000572585 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
ABR-218ENST00000572585 MT1MQ8N339 61 aa3.54□□□□□ -1.84
ABR-218ENST00000572585 SPRR2EP22531 72 aa3.52□□□□□ -1.85
ABR-218ENST00000572585 SPRR2BP35325 72 aa3.52□□□□□ -1.85
ABR-218ENST00000572585 SPRR2AP35326 72 aa3.52□□□□□ -1.85
ABR-218ENST00000572585 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
ABR-218ENST00000572585 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
ABR-218ENST00000572585 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
ABR-218ENST00000572585 PRM1P04553 51 aa3.48□□□□□ -1.85
ABR-218ENST00000572585 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
ABR-218ENST00000572585 MT1AP04731 61 aa3.46□□□□□ -1.86
ABR-218ENST00000572585 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
ABR-218ENST00000572585 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
ABR-218ENST00000572585 SPRR2DP22532 72 aa3.37□□□□□ -1.87
ABR-218ENST00000572585 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
ABR-218ENST00000572585 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
ABR-218ENST00000572585 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
ABR-218ENST00000572585 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
ABR-218ENST00000572585 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
ABR-218ENST00000572585 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
ABR-218ENST00000572585 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
ABR-218ENST00000572585 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
ABR-218ENST00000572585 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
ABR-218ENST00000572585 MT4P47944 62 aa3.06□□□□□ -1.92
ABR-218ENST00000572585 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
ABR-218ENST00000572585 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
ABR-218ENST00000572585 MT3P25713 68 aa2.99□□□□□ -1.93
ABR-218ENST00000572585 NEBP20929 6669 aa2.98□□□□□ -1.93
ABR-218ENST00000572585 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
ABR-218ENST00000572585 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
ABR-218ENST00000572585 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
ABR-218ENST00000572585 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
ABR-218ENST00000572585 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
ABR-218ENST00000572585 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
ABR-218ENST00000572585 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
ABR-218ENST00000572585 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
ABR-218ENST00000572585 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
ABR-218ENST00000572585 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
ABR-218ENST00000572585 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
ABR-218ENST00000572585 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
ABR-218ENST00000572585 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
ABR-218ENST00000572585 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
ABR-218ENST00000572585 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
ABR-218ENST00000572585 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
ABR-218ENST00000572585 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
ABR-218ENST00000572585 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
ABR-218ENST00000572585 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
ABR-218ENST00000572585 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
ABR-218ENST00000572585 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
ABR-218ENST00000572585 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
ABR-218ENST00000572585 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
ABR-218ENST00000572585 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
ABR-218ENST00000572585 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
ABR-218ENST00000572585 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
ABR-218ENST00000572585 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ABR-218ENST00000572585 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
ABR-218ENST00000572585 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
ABR-218ENST00000572585 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
ABR-218ENST00000572585 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
ABR-218ENST00000572585 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
ABR-218ENST00000572585 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms