RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
TOM1L1-210ENST00000572158 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
TOM1L1-210ENST00000572158 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
TOM1L1-210ENST00000572158 INE1O15225 51 aa4□□□□□ -1.77
TOM1L1-210ENST00000572158 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
TOM1L1-210ENST00000572158 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
TOM1L1-210ENST00000572158 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
TOM1L1-210ENST00000572158 KMT2DO14686 5537 aa3.86□□□□□ -1.79
TOM1L1-210ENST00000572158 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
TOM1L1-210ENST00000572158 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
TOM1L1-210ENST00000572158 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
TOM1L1-210ENST00000572158 TNP1P09430 55 aa3.76□□□□□ -1.81
TOM1L1-210ENST00000572158 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
TOM1L1-210ENST00000572158 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
TOM1L1-210ENST00000572158 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
TOM1L1-210ENST00000572158 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
TOM1L1-210ENST00000572158 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
TOM1L1-210ENST00000572158 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
TOM1L1-210ENST00000572158 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
TOM1L1-210ENST00000572158 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
TOM1L1-210ENST00000572158 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
TOM1L1-210ENST00000572158 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
TOM1L1-210ENST00000572158 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
TOM1L1-210ENST00000572158 MT1EP04732 61 aa3.59□□□□□ -1.84
TOM1L1-210ENST00000572158 MT3P25713 68 aa3.58□□□□□ -1.84
TOM1L1-210ENST00000572158 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
TOM1L1-210ENST00000572158 NEBP20929 6669 aa3.54□□□□□ -1.84
TOM1L1-210ENST00000572158 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
TOM1L1-210ENST00000572158 SPRR2EP22531 72 aa3.5□□□□□ -1.85
TOM1L1-210ENST00000572158 SPRR2BP35325 72 aa3.5□□□□□ -1.85
TOM1L1-210ENST00000572158 SPRR2AP35326 72 aa3.5□□□□□ -1.85
TOM1L1-210ENST00000572158 MT1LQ93083 61 aa3.49□□□□□ -1.85
TOM1L1-210ENST00000572158 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
TOM1L1-210ENST00000572158 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
TOM1L1-210ENST00000572158 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
TOM1L1-210ENST00000572158 MT1GP13640 62 aa3.42□□□□□ -1.86
TOM1L1-210ENST00000572158 MT1MQ8N339 61 aa3.39□□□□□ -1.87
TOM1L1-210ENST00000572158 SPRR2DP22532 72 aa3.38□□□□□ -1.87
TOM1L1-210ENST00000572158 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
TOM1L1-210ENST00000572158 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
TOM1L1-210ENST00000572158 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
TOM1L1-210ENST00000572158 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
TOM1L1-210ENST00000572158 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
TOM1L1-210ENST00000572158 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
TOM1L1-210ENST00000572158 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
TOM1L1-210ENST00000572158 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
TOM1L1-210ENST00000572158 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
TOM1L1-210ENST00000572158 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
TOM1L1-210ENST00000572158 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
TOM1L1-210ENST00000572158 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
TOM1L1-210ENST00000572158 MT1AP04731 61 aa2.95□□□□□ -1.94
TOM1L1-210ENST00000572158 MT4P47944 62 aa2.95□□□□□ -1.94
TOM1L1-210ENST00000572158 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
TOM1L1-210ENST00000572158 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
TOM1L1-210ENST00000572158 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
TOM1L1-210ENST00000572158 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
TOM1L1-210ENST00000572158 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
TOM1L1-210ENST00000572158 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
TOM1L1-210ENST00000572158 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
TOM1L1-210ENST00000572158 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
TOM1L1-210ENST00000572158 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
TOM1L1-210ENST00000572158 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
TOM1L1-210ENST00000572158 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
TOM1L1-210ENST00000572158 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
TOM1L1-210ENST00000572158 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
TOM1L1-210ENST00000572158 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
TOM1L1-210ENST00000572158 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
TOM1L1-210ENST00000572158 PRM1P04553 51 aa2.33□□□□□ -2.04
TOM1L1-210ENST00000572158 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TOM1L1-210ENST00000572158 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
TOM1L1-210ENST00000572158 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
TOM1L1-210ENST00000572158 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
TOM1L1-210ENST00000572158 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
TOM1L1-210ENST00000572158 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
TOM1L1-210ENST00000572158 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
TOM1L1-210ENST00000572158 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
TOM1L1-210ENST00000572158 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 94 ms