RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
HERPUD1-219ENST00000570273 SPRR2EP22531 72 aa5.56□□□□□ -1.52
HERPUD1-219ENST00000570273 SPRR2BP35325 72 aa5.56□□□□□ -1.52
HERPUD1-219ENST00000570273 SPRR2AP35326 72 aa5.56□□□□□ -1.52
HERPUD1-219ENST00000570273 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
HERPUD1-219ENST00000570273 MT1LQ93083 61 aa5.52□□□□□ -1.53
HERPUD1-219ENST00000570273 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
HERPUD1-219ENST00000570273 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
HERPUD1-219ENST00000570273 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
HERPUD1-219ENST00000570273 MT1GP13640 62 aa5.4□□□□□ -1.54
HERPUD1-219ENST00000570273 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
HERPUD1-219ENST00000570273 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
HERPUD1-219ENST00000570273 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
HERPUD1-219ENST00000570273 SPRR2DP22532 72 aa5.36□□□□□ -1.55
HERPUD1-219ENST00000570273 MT1MQ8N339 61 aa5.35□□□□□ -1.55
HERPUD1-219ENST00000570273 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
HERPUD1-219ENST00000570273 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
HERPUD1-219ENST00000570273 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
HERPUD1-219ENST00000570273 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
HERPUD1-219ENST00000570273 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
HERPUD1-219ENST00000570273 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
HERPUD1-219ENST00000570273 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
HERPUD1-219ENST00000570273 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
HERPUD1-219ENST00000570273 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
HERPUD1-219ENST00000570273 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
HERPUD1-219ENST00000570273 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
HERPUD1-219ENST00000570273 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
HERPUD1-219ENST00000570273 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
HERPUD1-219ENST00000570273 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
HERPUD1-219ENST00000570273 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
HERPUD1-219ENST00000570273 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
HERPUD1-219ENST00000570273 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
HERPUD1-219ENST00000570273 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
HERPUD1-219ENST00000570273 MT1AP04731 61 aa4.7□□□□□ -1.66
HERPUD1-219ENST00000570273 MT4P47944 62 aa4.66□□□□□ -1.66
HERPUD1-219ENST00000570273 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.67
HERPUD1-219ENST00000570273 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
HERPUD1-219ENST00000570273 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
HERPUD1-219ENST00000570273 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
HERPUD1-219ENST00000570273 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
HERPUD1-219ENST00000570273 NDUFAF8A1L188 74 aa4.46□□□□□ -1.69
HERPUD1-219ENST00000570273 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.69
HERPUD1-219ENST00000570273 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
HERPUD1-219ENST00000570273 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
HERPUD1-219ENST00000570273 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
HERPUD1-219ENST00000570273 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
HERPUD1-219ENST00000570273 KRTAP5-10Q6L8G5 202 aa4.31□□□□□ -1.72
HERPUD1-219ENST00000570273 MT3P25713 68 aa4.27□□□□□ -1.73
HERPUD1-219ENST00000570273 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
HERPUD1-219ENST00000570273 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
HERPUD1-219ENST00000570273 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
HERPUD1-219ENST00000570273 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
HERPUD1-219ENST00000570273 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
HERPUD1-219ENST00000570273 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
HERPUD1-219ENST00000570273 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
HERPUD1-219ENST00000570273 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
HERPUD1-219ENST00000570273 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
HERPUD1-219ENST00000570273 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
HERPUD1-219ENST00000570273 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
HERPUD1-219ENST00000570273 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
HERPUD1-219ENST00000570273 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
HERPUD1-219ENST00000570273 INE1O15225 51 aa3.67□□□□□ -1.82
HERPUD1-219ENST00000570273 H3BS24 57 aa3.65□□□□□ -1.83
HERPUD1-219ENST00000570273 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
HERPUD1-219ENST00000570273 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-219ENST00000570273 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
HERPUD1-219ENST00000570273 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
HERPUD1-219ENST00000570273 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-219ENST00000570273 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
HERPUD1-219ENST00000570273 PRM1P04553 51 aa3.21□□□□□ -1.9
HERPUD1-219ENST00000570273 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
HERPUD1-219ENST00000570273 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
HERPUD1-219ENST00000570273 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
HERPUD1-219ENST00000570273 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
HERPUD1-219ENST00000570273 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
HERPUD1-219ENST00000570273 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
HERPUD1-219ENST00000570273 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
HERPUD1-219ENST00000570273 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms