RNA–Protein interactions for RNA: ENST00000570117.5

TAF1C-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

APPRIS ALT2 TSL 2 BASIC

Gene TAF1C, Length 2,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-222	ENST00000570117	INE1	O15225	51 aa		6	□□□□□ -1.45
TAF1C-222	ENST00000570117	MACF1	Q9UPN3	7388 aa	Known RBP	5.96	□□□□□ -1.46
TAF1C-222	ENST00000570117	KRTAP2-3	P0C7H8	128 aa		5.91	□□□□□ -1.46
TAF1C-222	ENST00000570117	KRTAP2-4	Q9BYR9	128 aa		5.91	□□□□□ -1.46
TAF1C-222	ENST00000570117	KRTAP2-1	Q9BYU5	128 aa		5.91	□□□□□ -1.46
TAF1C-222	ENST00000570117	MUC12	Q9UKN1	5478 aa		5.83	□□□□□ -1.48
TAF1C-222	ENST00000570117	SPRR2F	Q96RM1	72 aa		5.83	□□□□□ -1.48
TAF1C-222	ENST00000570117	KRTAP4-3	Q9BYR4	195 aa		5.81	□□□□□ -1.48
TAF1C-222	ENST00000570117	SYNE2	Q8WXH0	6885 aa	Known RBP	5.79	□□□□□ -1.48
TAF1C-222	ENST00000570117	KRTAP19-3	Q7Z4W3	81 aa		5.76	□□□□□ -1.49
TAF1C-222	ENST00000570117	LOC100996750	A0A140TA64	210 aa		5.75	□□□□□ -1.49
TAF1C-222	ENST00000570117	MT1M	Q8N339	61 aa		5.73	□□□□□ -1.49
TAF1C-222	ENST00000570117	MT1G	P13640	62 aa		5.72	□□□□□ -1.49
TAF1C-222	ENST00000570117	KRTAP5-9	P26371	169 aa		5.66	□□□□□ -1.5
TAF1C-222	ENST00000570117	KRTAP9-6	A0A140TA67	174 aa		5.66	□□□□□ -1.5
TAF1C-222	ENST00000570117	LCE5A	Q5TCM9	118 aa		5.65	□□□□□ -1.51
TAF1C-222	ENST00000570117	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.58	□□□□□ -1.52
TAF1C-222	ENST00000570117	MDN1	Q9NU22	5596 aa		5.55	□□□□□ -1.52
TAF1C-222	ENST00000570117	LCE1A	Q5T7P2	110 aa		5.53	□□□□□ -1.52
TAF1C-222	ENST00000570117	DST	Q03001	7570 aa	Known RBP	5.49	□□□□□ -1.53
TAF1C-222	ENST00000570117	KRTAP6-3	Q3LI67	103 aa		5.48	□□□□□ -1.53
TAF1C-222	ENST00000570117	SPRR2E	P22531	72 aa		5.47	□□□□□ -1.53
TAF1C-222	ENST00000570117	SPRR2B	P35325	72 aa		5.47	□□□□□ -1.53
TAF1C-222	ENST00000570117	SPRR2A	P35326	72 aa		5.47	□□□□□ -1.53
TAF1C-222	ENST00000570117	SPRR2D	P22532	72 aa		5.26	□□□□□ -1.57
TAF1C-222	ENST00000570117	KRTAP9-7	A8MTY7	169 aa		5.22	□□□□□ -1.57
TAF1C-222	ENST00000570117	LCE3B	Q5TA77	95 aa		5.2	□□□□□ -1.58
TAF1C-222	ENST00000570117	KRTAP6-1	Q3LI64	71 aa		5.19	□□□□□ -1.58
TAF1C-222	ENST00000570117	KRTAP12-4	P60329	112 aa		5.15	□□□□□ -1.58
TAF1C-222	ENST00000570117	MT1A	P04731	61 aa		5.13	□□□□□ -1.59
TAF1C-222	ENST00000570117	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.11	□□□□□ -1.59
TAF1C-222	ENST00000570117	KRTAP4-9	Q9BYQ8	210 aa		5.11	□□□□□ -1.59
TAF1C-222	ENST00000570117	NEB	P20929	6669 aa		5.09	□□□□□ -1.59
TAF1C-222	ENST00000570117	SYNE1	Q8NF91	8797 aa	Known RBP	5.04	□□□□□ -1.6
TAF1C-222	ENST00000570117	LCE3D	Q9BYE3	92 aa		4.88	□□□□□ -1.63
TAF1C-222	ENST00000570117	KRTAP9-4	Q9BYQ2	154 aa		4.84	□□□□□ -1.63
TAF1C-222	ENST00000570117	LCE3E	Q5T5B0	92 aa		4.8	□□□□□ -1.64
TAF1C-222	ENST00000570117	KRTAP5-4	Q6L8H1	288 aa		4.77	□□□□□ -1.65
TAF1C-222	ENST00000570117	KRTAP2-2	Q9BYT5	123 aa		4.67	□□□□□ -1.66
TAF1C-222	ENST00000570117	KRTAP6-2	Q3LI66	62 aa		4.66	□□□□□ -1.66
TAF1C-222	ENST00000570117	KRTAP20-1	Q3LI63	56 aa		4.63	□□□□□ -1.67
TAF1C-222	ENST00000570117	LCE4A	Q5TA78	99 aa		4.62	□□□□□ -1.67
TAF1C-222	ENST00000570117	MT4	P47944	62 aa		4.6	□□□□□ -1.67
TAF1C-222	ENST00000570117	MT3	P25713	68 aa		4.59	□□□□□ -1.67
TAF1C-222	ENST00000570117	KRTAP4-6	Q9BYQ5	205 aa		4.58	□□□□□ -1.68
TAF1C-222	ENST00000570117	PRM1	P04553	51 aa		4.54	□□□□□ -1.68
TAF1C-222	ENST00000570117	OBSCN	Q5VST9	7968 aa		4.49	□□□□□ -1.69
TAF1C-222	ENST00000570117	KRTAP20-2	Q3LI61	65 aa		4.47	□□□□□ -1.69
TAF1C-222	ENST00000570117	LCE1D	Q5T752	114 aa		4.47	□□□□□ -1.69
TAF1C-222	ENST00000570117	HMCN1	Q96RW7	5635 aa		4.43	□□□□□ -1.7
TAF1C-222	ENST00000570117	KRTAP5-2	Q701N4	177 aa		4.35	□□□□□ -1.71
TAF1C-222	ENST00000570117	KRTAP5-3	Q6L8H2	238 aa		4.29	□□□□□ -1.72
TAF1C-222	ENST00000570117	LCE1E	Q5T753	118 aa		3.89	□□□□□ -1.79
TAF1C-222	ENST00000570117	MUC5AC	P98088	5654 aa		3.88	□□□□□ -1.79
TAF1C-222	ENST00000570117	KRTAP4-11	Q9BYQ6	195 aa		3.84	□□□□□ -1.79
TAF1C-222	ENST00000570117	AHNAK2	Q8IVF2	5795 aa		3.78	□□□□□ -1.81
TAF1C-222	ENST00000570117	KRTAP5-1	Q6L8H4	278 aa		3.76	□□□□□ -1.81
TAF1C-222	ENST00000570117	LCE1B	Q5T7P3	118 aa		3.72	□□□□□ -1.81
TAF1C-222	ENST00000570117	KRTAP5-8	O75690	187 aa		3.69	□□□□□ -1.82
TAF1C-222	ENST00000570117	KRTAP5-10	Q6L8G5	202 aa		3.68	□□□□□ -1.82
TAF1C-222	ENST00000570117	KRTAP4-2	Q9BYR5	136 aa		3.65	□□□□□ -1.82
TAF1C-222	ENST00000570117	LCE1C	Q5T751	118 aa		3.65	□□□□□ -1.83
TAF1C-222	ENST00000570117	KRTAP5-7	Q6L8G8	165 aa		3.57	□□□□□ -1.84
TAF1C-222	ENST00000570117	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.43	□□□□□ -1.86
TAF1C-222	ENST00000570117	KRTAP21-2	Q3LI59	83 aa		3.38	□□□□□ -1.87
TAF1C-222	ENST00000570117	GPR98	Q8WXG9	6306 aa		3.32	□□□□□ -1.88
TAF1C-222	ENST00000570117	KRTAP9-9	Q9BYP9	154 aa		3.28	□□□□□ -1.88
TAF1C-222	ENST00000570117	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.2	□□□□□ -1.9
TAF1C-222	ENST00000570117	KRTAP5-11	Q6L8G4	156 aa		3.19	□□□□□ -1.9
TAF1C-222	ENST00000570117	KRTAP4-4	Q9BYR3	166 aa		3.05	□□□□□ -1.92
TAF1C-222	ENST00000570117	KRTAP4-12	Q9BQ66	201 aa		3.04	□□□□□ -1.92
TAF1C-222	ENST00000570117	KRTAP21-1	Q3LI58	79 aa		2.86	□□□□□ -1.95
TAF1C-222	ENST00000570117	LCE1F	Q5T754	118 aa		2.81	□□□□□ -1.96
TAF1C-222	ENST00000570117	MUC19	Q7Z5P9	8384 aa		2.79	□□□□□ -1.96
TAF1C-222	ENST00000570117	PHGR1	C9JFL3	82 aa		2.75	□□□□□ -1.97
TAF1C-222	ENST00000570117	AHNAK	Q09666	5890 aa	Known RBP	2.73	□□□□□ -1.97
TAF1C-222	ENST00000570117	MUC16	Q8WXI7	14507 aa		1.79	□□□□□ -2.12

Retrieved 77 of 20,778 RNA–protein pairs in 66.2 ms