RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 CRIPTQ9P021 101 aa2.2□□□□□ -2.06
CNOT1-219ENST00000569882 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
CNOT1-219ENST00000569882 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
CNOT1-219ENST00000569882 ACYP2P14621 99 aa2.18□□□□□ -2.06
CNOT1-219ENST00000569882 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
CNOT1-219ENST00000569882 R4GN34 69 aa2.17□□□□□ -2.06
CNOT1-219ENST00000569882 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
CNOT1-219ENST00000569882 H0YAA0 97 aa2.15□□□□□ -2.07
CNOT1-219ENST00000569882 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
CNOT1-219ENST00000569882 A0A1B0GU69 56 aa2.14□□□□□ -2.07
CNOT1-219ENST00000569882 M0QZ58 72 aa2.14□□□□□ -2.07
CNOT1-219ENST00000569882 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
CNOT1-219ENST00000569882 USH2AO75445 5202 aa2.12□□□□□ -2.07
CNOT1-219ENST00000569882 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
CNOT1-219ENST00000569882 MT1BP07438 61 aa2.1□□□□□ -2.07
CNOT1-219ENST00000569882 SSPOA2VEC9 5147 aa2.09□□□□□ -2.07
CNOT1-219ENST00000569882 KRTAP12-2P59991 146 aa2.09□□□□□ -2.07
CNOT1-219ENST00000569882 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
CNOT1-219ENST00000569882 MACF1Q9UPN3 7388 aaKnown RBP2.08□□□□□ -2.08
CNOT1-219ENST00000569882 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
CNOT1-219ENST00000569882 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
CNOT1-219ENST00000569882 INE1O15225 51 aa2.03□□□□□ -2.08
CNOT1-219ENST00000569882 A0A0D9SG42 100 aa2□□□□□ -2.09
CNOT1-219ENST00000569882 MT1XP80297 61 aa1.99□□□□□ -2.09
CNOT1-219ENST00000569882 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
CNOT1-219ENST00000569882 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
CNOT1-219ENST00000569882 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
CNOT1-219ENST00000569882 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
CNOT1-219ENST00000569882 SPRR2EP22531 72 aa1.95□□□□□ -2.1
CNOT1-219ENST00000569882 SPRR2BP35325 72 aa1.95□□□□□ -2.1
CNOT1-219ENST00000569882 SPRR2AP35326 72 aa1.95□□□□□ -2.1
CNOT1-219ENST00000569882 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
CNOT1-219ENST00000569882 KRTAP13-4Q3LI77 160 aa1.94□□□□□ -2.1
CNOT1-219ENST00000569882 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
CNOT1-219ENST00000569882 NEBP20929 6669 aa1.89□□□□□ -2.11
CNOT1-219ENST00000569882 SPRR2DP22532 72 aa1.88□□□□□ -2.11
CNOT1-219ENST00000569882 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
CNOT1-219ENST00000569882 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
CNOT1-219ENST00000569882 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
CNOT1-219ENST00000569882 TNP1P09430 55 aa1.85□□□□□ -2.11
CNOT1-219ENST00000569882 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
CNOT1-219ENST00000569882 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
CNOT1-219ENST00000569882 KMT2DO14686 5537 aa1.84□□□□□ -2.11
CNOT1-219ENST00000569882 C10orf95Q9H7T3 257 aa1.83□□□□□ -2.12
CNOT1-219ENST00000569882 KRTAP2-1Q9BYU5 128 aa1.8□□□□□ -2.12
CNOT1-219ENST00000569882 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
CNOT1-219ENST00000569882 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
CNOT1-219ENST00000569882 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
CNOT1-219ENST00000569882 MT1EP04732 61 aa1.77□□□□□ -2.13
CNOT1-219ENST00000569882 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
CNOT1-219ENST00000569882 SPRR5A0A1B0GTR4 108 aa1.76□□□□□ -2.13
CNOT1-219ENST00000569882 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
CNOT1-219ENST00000569882 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CNOT1-219ENST00000569882 MT1GP13640 62 aa1.73□□□□□ -2.13
CNOT1-219ENST00000569882 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
CNOT1-219ENST00000569882 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
CNOT1-219ENST00000569882 MT1LQ93083 61 aa1.7□□□□□ -2.14
CNOT1-219ENST00000569882 MT1MQ8N339 61 aa1.69□□□□□ -2.14
CNOT1-219ENST00000569882 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
CNOT1-219ENST00000569882 MT4P47944 62 aa1.64□□□□□ -2.15
CNOT1-219ENST00000569882 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
CNOT1-219ENST00000569882 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
CNOT1-219ENST00000569882 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
CNOT1-219ENST00000569882 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
CNOT1-219ENST00000569882 MT1AP04731 61 aa1.46□□□□□ -2.18
CNOT1-219ENST00000569882 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
CNOT1-219ENST00000569882 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
CNOT1-219ENST00000569882 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
CNOT1-219ENST00000569882 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
CNOT1-219ENST00000569882 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
CNOT1-219ENST00000569882 SYNE1Q8NF91 8797 aaKnown RBP1.36□□□□□ -2.19
CNOT1-219ENST00000569882 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CNOT1-219ENST00000569882 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
CNOT1-219ENST00000569882 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
CNOT1-219ENST00000569882 PRM1P04553 51 aa1.06□□□□□ -2.24
CNOT1-219ENST00000569882 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
CNOT1-219ENST00000569882 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
CNOT1-219ENST00000569882 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms