RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, human

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-225	ENST00000569709	KRTAP4-8	A0A0G2JLE6	195 aa		4.36	□□□□□ -1.71
RNPS1-225	ENST00000569709	TNP1	P09430	55 aa		4.36	□□□□□ -1.71
RNPS1-225	ENST00000569709	KRTAP4-8	Q9BYQ9	185 aa		4.36	□□□□□ -1.71
RNPS1-225	ENST00000569709	LCE3B	Q5TA77	95 aa		4.34	□□□□□ -1.71
RNPS1-225	ENST00000569709	DST	Q03001	7570 aa	Known RBP	4.3	□□□□□ -1.72
RNPS1-225	ENST00000569709	PP632	Q6XCG6	107 aa		4.3	□□□□□ -1.72
RNPS1-225	ENST00000569709	KRTAP10-7	P60409	375 aa	Predicted RBP	4.26	□□□□□ -1.73
RNPS1-225	ENST00000569709	KRTAP10-12	P60413	245 aa		4.23	□□□□□ -1.73
RNPS1-225	ENST00000569709	KRTAP23-1	A1A580	65 aa		4.21	□□□□□ -1.74
RNPS1-225	ENST00000569709	LCE3A	Q5TA76	89 aa		4.15	□□□□□ -1.75
RNPS1-225	ENST00000569709	KRTAP4-9	Q9BYQ8	210 aa		4.11	□□□□□ -1.75
RNPS1-225	ENST00000569709		H3BS24	57 aa		4.09	□□□□□ -1.75
RNPS1-225	ENST00000569709	KRTAP15-1	Q3LI76	137 aa		4.09	□□□□□ -1.75
RNPS1-225	ENST00000569709	LCE5A	Q5TCM9	118 aa		4.04	□□□□□ -1.76
RNPS1-225	ENST00000569709	HMCN1	Q96RW7	5635 aa		4.01	□□□□□ -1.77
RNPS1-225	ENST00000569709	KRTAP19-7	Q3SYF9	63 aa		3.99	□□□□□ -1.77
RNPS1-225	ENST00000569709	KRTAP19-3	Q7Z4W3	81 aa		3.99	□□□□□ -1.77
RNPS1-225	ENST00000569709	LCE1D	Q5T752	114 aa		3.98	□□□□□ -1.77
RNPS1-225	ENST00000569709	AHNAK2	Q8IVF2	5795 aa		3.98	□□□□□ -1.77
RNPS1-225	ENST00000569709	MT1E	P04732	61 aa		3.97	□□□□□ -1.77
RNPS1-225	ENST00000569709	KRTAP12-3	P60328	96 aa		3.96	□□□□□ -1.78
RNPS1-225	ENST00000569709	MT4	P47944	62 aa		3.91	□□□□□ -1.78
RNPS1-225	ENST00000569709	KRTAP19-5	Q3LI72	72 aa		3.89	□□□□□ -1.79
RNPS1-225	ENST00000569709	LCE4A	Q5TA78	99 aa		3.89	□□□□□ -1.79
RNPS1-225	ENST00000569709	NDUFAF8	A1L188	74 aa		3.88	□□□□□ -1.79
RNPS1-225	ENST00000569709	MT1G	P13640	62 aa		3.86	□□□□□ -1.79
RNPS1-225	ENST00000569709	LUZP6	Q538Z0	58 aa		3.86	□□□□□ -1.79
RNPS1-225	ENST00000569709	SPRR5	A0A1B0GTR4	108 aa		3.84	□□□□□ -1.79
RNPS1-225	ENST00000569709	KRTAP5-10	Q6L8G5	202 aa		3.82	□□□□□ -1.8
RNPS1-225	ENST00000569709	MT1M	Q8N339	61 aa		3.8	□□□□□ -1.8
RNPS1-225	ENST00000569709	KRTAP5-4	Q6L8H1	288 aa		3.77	□□□□□ -1.81
RNPS1-225	ENST00000569709	KRTAP4-6	Q9BYQ5	205 aa		3.76	□□□□□ -1.81
RNPS1-225	ENST00000569709	MT1L	Q93083	61 aa		3.75	□□□□□ -1.81
RNPS1-225	ENST00000569709	KRTAP4-3	Q9BYR4	195 aa		3.73	□□□□□ -1.81
RNPS1-225	ENST00000569709	KRTAP5-7	Q6L8G8	165 aa		3.71	□□□□□ -1.82
RNPS1-225	ENST00000569709	LCE3C	Q5T5A8	94 aa		3.7	□□□□□ -1.82
RNPS1-225	ENST00000569709	KRTAP5-3	Q6L8H2	238 aa		3.67	□□□□□ -1.82
RNPS1-225	ENST00000569709	KRTAP19-4	Q3LI73	84 aa		3.62	□□□□□ -1.83
RNPS1-225	ENST00000569709	KRTAP20-2	Q3LI61	65 aa		3.59	□□□□□ -1.83
RNPS1-225	ENST00000569709	KRTAP4-7	Q9BYR0	210 aa		3.58	□□□□□ -1.84
RNPS1-225	ENST00000569709		A0A0A0MQY5	61 aa		3.53	□□□□□ -1.84
RNPS1-225	ENST00000569709	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.5	□□□□□ -1.85
RNPS1-225	ENST00000569709	SYNE1	Q8NF91	8797 aa	Known RBP	3.49	□□□□□ -1.85
RNPS1-225	ENST00000569709	KRTAP12-4	P60329	112 aa		3.49	□□□□□ -1.85
RNPS1-225	ENST00000569709	KRTAP9-6	A8MVA2	160 aa		3.48	□□□□□ -1.85
RNPS1-225	ENST00000569709	LOC100996750	A0A140TA64	210 aa		3.39	□□□□□ -1.87
RNPS1-225	ENST00000569709	KRTAP4-11	Q9BYQ6	195 aa		3.34	□□□□□ -1.87
RNPS1-225	ENST00000569709	AHNAK	Q09666	5890 aa	Known RBP	3.34	□□□□□ -1.87
RNPS1-225	ENST00000569709	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.31	□□□□□ -1.88
RNPS1-225	ENST00000569709	MUC5AC	P98088	5654 aa		3.3	□□□□□ -1.88
RNPS1-225	ENST00000569709	OBSCN	Q5VST9	7968 aa		3.27	□□□□□ -1.89
RNPS1-225	ENST00000569709	KRTAP5-2	Q701N4	177 aa		3.26	□□□□□ -1.89
RNPS1-225	ENST00000569709	KRTAP5-8	O75690	187 aa		3.23	□□□□□ -1.89
RNPS1-225	ENST00000569709	INE1	O15225	51 aa		3.18	□□□□□ -1.9
RNPS1-225	ENST00000569709	MT1A	P04731	61 aa		3.18	□□□□□ -1.9
RNPS1-225	ENST00000569709	KRTAP6-1	Q3LI64	71 aa		3.18	□□□□□ -1.9
RNPS1-225	ENST00000569709	KRTAP9-9	Q9BYP9	154 aa		3.12	□□□□□ -1.91
RNPS1-225	ENST00000569709	KRTAP6-2	Q3LI66	62 aa		3.1	□□□□□ -1.91
RNPS1-225	ENST00000569709	KRTAP9-4	Q9BYQ2	154 aa		3.1	□□□□□ -1.91
RNPS1-225	ENST00000569709	KRTAP5-1	Q6L8H4	278 aa		2.97	□□□□□ -1.93
RNPS1-225	ENST00000569709	MT3	P25713	68 aa		2.92	□□□□□ -1.94
RNPS1-225	ENST00000569709	LCE3D	Q9BYE3	92 aa		2.81	□□□□□ -1.96
RNPS1-225	ENST00000569709	LCE3E	Q5T5B0	92 aa		2.75	□□□□□ -1.97
RNPS1-225	ENST00000569709	LCE1E	Q5T753	118 aa		2.74	□□□□□ -1.97
RNPS1-225	ENST00000569709	LCE1B	Q5T7P3	118 aa		2.63	□□□□□ -1.99
RNPS1-225	ENST00000569709	KRTAP4-2	Q9BYR5	136 aa		2.62	□□□□□ -1.99
RNPS1-225	ENST00000569709	LCE1C	Q5T751	118 aa		2.55	□□□□□ -2
RNPS1-225	ENST00000569709	PRM1	P04553	51 aa		2.5	□□□□□ -2.01
RNPS1-225	ENST00000569709	KRTAP4-12	Q9BQ66	201 aa		2.49	□□□□□ -2.01
RNPS1-225	ENST00000569709	KRTAP5-11	Q6L8G4	156 aa		2.35	□□□□□ -2.03
RNPS1-225	ENST00000569709	LCE1F	Q5T754	118 aa		2.32	□□□□□ -2.04
RNPS1-225	ENST00000569709	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.28	□□□□□ -2.04
RNPS1-225	ENST00000569709	PHGR1	C9JFL3	82 aa		2.25	□□□□□ -2.05
RNPS1-225	ENST00000569709	KRTAP21-2	Q3LI59	83 aa		2.09	□□□□□ -2.07
RNPS1-225	ENST00000569709	MUC19	Q7Z5P9	8384 aa		2.01	□□□□□ -2.09
RNPS1-225	ENST00000569709	KRTAP4-4	Q9BYR3	166 aa		1.98	□□□□□ -2.09
RNPS1-225	ENST00000569709	KRTAP21-1	Q3LI58	79 aa		1.71	□□□□□ -2.14
RNPS1-225	ENST00000569709	MUC16	Q8WXI7	14507 aa		1.45	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 184.2 ms