RNA–Protein interactions for RNA: ENST00000569098.1

TNRC6A-216, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 587 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-216ENST00000569098 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
TNRC6A-216ENST00000569098 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
TNRC6A-216ENST00000569098 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
TNRC6A-216ENST00000569098 SPRR2GQ9BYE4 73 aa2.5□□□□□ -2.01
TNRC6A-216ENST00000569098 M0R2T5 61 aa2.49□□□□□ -2.01
TNRC6A-216ENST00000569098 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
TNRC6A-216ENST00000569098 MT2AP02795 61 aa2.45□□□□□ -2.02
TNRC6A-216ENST00000569098 CAMK2N1Q7Z7J9 78 aa2.45□□□□□ -2.02
TNRC6A-216ENST00000569098 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
TNRC6A-216ENST00000569098 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
TNRC6A-216ENST00000569098 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-216ENST00000569098 MT1FP04733 61 aa2.42□□□□□ -2.02
TNRC6A-216ENST00000569098 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
TNRC6A-216ENST00000569098 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
TNRC6A-216ENST00000569098 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
TNRC6A-216ENST00000569098 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
TNRC6A-216ENST00000569098 USH2AO75445 5202 aa2.41□□□□□ -2.02
TNRC6A-216ENST00000569098 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
TNRC6A-216ENST00000569098 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
TNRC6A-216ENST00000569098 TNP1P09430 55 aa2.37□□□□□ -2.03
TNRC6A-216ENST00000569098 MT1BP07438 61 aa2.33□□□□□ -2.04
TNRC6A-216ENST00000569098 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
TNRC6A-216ENST00000569098 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
TNRC6A-216ENST00000569098 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
TNRC6A-216ENST00000569098 MT1XP80297 61 aa2.28□□□□□ -2.04
TNRC6A-216ENST00000569098 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
TNRC6A-216ENST00000569098 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
TNRC6A-216ENST00000569098 NEBP20929 6669 aa2.25□□□□□ -2.05
TNRC6A-216ENST00000569098 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
TNRC6A-216ENST00000569098 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
TNRC6A-216ENST00000569098 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
TNRC6A-216ENST00000569098 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
TNRC6A-216ENST00000569098 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
TNRC6A-216ENST00000569098 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
TNRC6A-216ENST00000569098 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
TNRC6A-216ENST00000569098 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
TNRC6A-216ENST00000569098 KMT2DO14686 5537 aa2.15□□□□□ -2.07
TNRC6A-216ENST00000569098 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
TNRC6A-216ENST00000569098 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
TNRC6A-216ENST00000569098 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
TNRC6A-216ENST00000569098 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
TNRC6A-216ENST00000569098 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
TNRC6A-216ENST00000569098 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
TNRC6A-216ENST00000569098 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
TNRC6A-216ENST00000569098 MT1EP04732 61 aa2□□□□□ -2.09
TNRC6A-216ENST00000569098 MT1LQ93083 61 aa1.98□□□□□ -2.09
TNRC6A-216ENST00000569098 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
TNRC6A-216ENST00000569098 MT1GP13640 62 aa1.93□□□□□ -2.1
TNRC6A-216ENST00000569098 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
TNRC6A-216ENST00000569098 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
TNRC6A-216ENST00000569098 MT1MQ8N339 61 aa1.87□□□□□ -2.11
TNRC6A-216ENST00000569098 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
TNRC6A-216ENST00000569098 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
TNRC6A-216ENST00000569098 SPRR2EP22531 72 aa1.84□□□□□ -2.11
TNRC6A-216ENST00000569098 SPRR2BP35325 72 aa1.84□□□□□ -2.11
TNRC6A-216ENST00000569098 SPRR2AP35326 72 aa1.84□□□□□ -2.11
TNRC6A-216ENST00000569098 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
TNRC6A-216ENST00000569098 INE1O15225 51 aa1.8□□□□□ -2.12
TNRC6A-216ENST00000569098 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.12
TNRC6A-216ENST00000569098 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
TNRC6A-216ENST00000569098 SPRR2DP22532 72 aa1.78□□□□□ -2.12
TNRC6A-216ENST00000569098 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
TNRC6A-216ENST00000569098 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
TNRC6A-216ENST00000569098 MT1AP04731 61 aa1.69□□□□□ -2.14
TNRC6A-216ENST00000569098 KRTAP6-1Q3LI64 71 aa1.63□□□□□ -2.15
TNRC6A-216ENST00000569098 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
TNRC6A-216ENST00000569098 MT4P47944 62 aa1.6□□□□□ -2.15
TNRC6A-216ENST00000569098 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
TNRC6A-216ENST00000569098 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
TNRC6A-216ENST00000569098 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
TNRC6A-216ENST00000569098 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
TNRC6A-216ENST00000569098 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
TNRC6A-216ENST00000569098 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
TNRC6A-216ENST00000569098 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
TNRC6A-216ENST00000569098 PRM1P04553 51 aa1.31□□□□□ -2.2
TNRC6A-216ENST00000569098 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
TNRC6A-216ENST00000569098 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
TNRC6A-216ENST00000569098 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms