RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
AC009041.2-204ENST00000568394 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
AC009041.2-204ENST00000568394 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
AC009041.2-204ENST00000568394 KRTAP2-1Q9BYU5 128 aa6.75□□□□□ -1.33
AC009041.2-204ENST00000568394 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
AC009041.2-204ENST00000568394 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
AC009041.2-204ENST00000568394 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
AC009041.2-204ENST00000568394 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
AC009041.2-204ENST00000568394 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
AC009041.2-204ENST00000568394 MT1LQ93083 61 aa6.55□□□□□ -1.36
AC009041.2-204ENST00000568394 MT1GP13640 62 aa6.53□□□□□ -1.36
AC009041.2-204ENST00000568394 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
AC009041.2-204ENST00000568394 MT1EP04732 61 aa6.49□□□□□ -1.37
AC009041.2-204ENST00000568394 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
AC009041.2-204ENST00000568394 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
AC009041.2-204ENST00000568394 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
AC009041.2-204ENST00000568394 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
AC009041.2-204ENST00000568394 MT1MQ8N339 61 aa6.12□□□□□ -1.43
AC009041.2-204ENST00000568394 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
AC009041.2-204ENST00000568394 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
AC009041.2-204ENST00000568394 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
AC009041.2-204ENST00000568394 PRM1P04553 51 aa5.9□□□□□ -1.47
AC009041.2-204ENST00000568394 SPRR2EP22531 72 aa5.84□□□□□ -1.47
AC009041.2-204ENST00000568394 SPRR2BP35325 72 aa5.84□□□□□ -1.47
AC009041.2-204ENST00000568394 SPRR2AP35326 72 aa5.84□□□□□ -1.47
AC009041.2-204ENST00000568394 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
AC009041.2-204ENST00000568394 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.48
AC009041.2-204ENST00000568394 LCE3EQ5T5B0 92 aa5.76□□□□□ -1.49
AC009041.2-204ENST00000568394 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
AC009041.2-204ENST00000568394 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
AC009041.2-204ENST00000568394 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
AC009041.2-204ENST00000568394 SPRR2DP22532 72 aa5.53□□□□□ -1.52
AC009041.2-204ENST00000568394 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
AC009041.2-204ENST00000568394 MT1AP04731 61 aa5.49□□□□□ -1.53
AC009041.2-204ENST00000568394 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
AC009041.2-204ENST00000568394 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
AC009041.2-204ENST00000568394 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
AC009041.2-204ENST00000568394 MT4P47944 62 aa5.3□□□□□ -1.56
AC009041.2-204ENST00000568394 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
AC009041.2-204ENST00000568394 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
AC009041.2-204ENST00000568394 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
AC009041.2-204ENST00000568394 NEBP20929 6669 aa5.11□□□□□ -1.59
AC009041.2-204ENST00000568394 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
AC009041.2-204ENST00000568394 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
AC009041.2-204ENST00000568394 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
AC009041.2-204ENST00000568394 MT3P25713 68 aa4.95□□□□□ -1.62
AC009041.2-204ENST00000568394 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
AC009041.2-204ENST00000568394 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
AC009041.2-204ENST00000568394 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
AC009041.2-204ENST00000568394 MUC19Q7Z5P9 8384 aa4.76□□□□□ -1.65
AC009041.2-204ENST00000568394 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
AC009041.2-204ENST00000568394 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
AC009041.2-204ENST00000568394 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
AC009041.2-204ENST00000568394 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
AC009041.2-204ENST00000568394 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
AC009041.2-204ENST00000568394 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
AC009041.2-204ENST00000568394 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
AC009041.2-204ENST00000568394 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
AC009041.2-204ENST00000568394 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
AC009041.2-204ENST00000568394 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
AC009041.2-204ENST00000568394 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
AC009041.2-204ENST00000568394 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
AC009041.2-204ENST00000568394 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
AC009041.2-204ENST00000568394 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
AC009041.2-204ENST00000568394 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
AC009041.2-204ENST00000568394 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
AC009041.2-204ENST00000568394 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
AC009041.2-204ENST00000568394 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
AC009041.2-204ENST00000568394 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
AC009041.2-204ENST00000568394 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
AC009041.2-204ENST00000568394 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
AC009041.2-204ENST00000568394 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
AC009041.2-204ENST00000568394 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
AC009041.2-204ENST00000568394 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
AC009041.2-204ENST00000568394 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
AC009041.2-204ENST00000568394 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
AC009041.2-204ENST00000568394 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms