RNA–Protein interactions for RNA: ENST00000567949.5

CTU2-210, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-210ENST00000567949 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
CTU2-210ENST00000567949 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.28
CTU2-210ENST00000567949 SPRR2FQ96RM1 72 aa7.04□□□□□ -1.28
CTU2-210ENST00000567949 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
CTU2-210ENST00000567949 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
CTU2-210ENST00000567949 MT1GP13640 62 aa6.98□□□□□ -1.29
CTU2-210ENST00000567949 KRTAP9-6A8MVA2 160 aa6.94□□□□□ -1.3
CTU2-210ENST00000567949 MT1MQ8N339 61 aa6.92□□□□□ -1.3
CTU2-210ENST00000567949 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
CTU2-210ENST00000567949 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
CTU2-210ENST00000567949 KRTAP5-9P26371 169 aa6.88□□□□□ -1.31
CTU2-210ENST00000567949 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
CTU2-210ENST00000567949 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
CTU2-210ENST00000567949 KRTAP4-3Q9BYR4 195 aa6.82□□□□□ -1.32
CTU2-210ENST00000567949 LCE1AQ5T7P2 110 aa6.7□□□□□ -1.34
CTU2-210ENST00000567949 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
CTU2-210ENST00000567949 SPRR2EP22531 72 aa6.62□□□□□ -1.35
CTU2-210ENST00000567949 SPRR2BP35325 72 aa6.62□□□□□ -1.35
CTU2-210ENST00000567949 SPRR2AP35326 72 aa6.62□□□□□ -1.35
CTU2-210ENST00000567949 MDN1Q9NU22 5596 aa6.6□□□□□ -1.35
CTU2-210ENST00000567949 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
CTU2-210ENST00000567949 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
CTU2-210ENST00000567949 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
CTU2-210ENST00000567949 NEBP20929 6669 aa6.45□□□□□ -1.38
CTU2-210ENST00000567949 INE1O15225 51 aa6.42□□□□□ -1.38
CTU2-210ENST00000567949 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
CTU2-210ENST00000567949 SPRR2DP22532 72 aa6.37□□□□□ -1.39
CTU2-210ENST00000567949 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
CTU2-210ENST00000567949 MT1AP04731 61 aa6.15□□□□□ -1.42
CTU2-210ENST00000567949 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
CTU2-210ENST00000567949 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
CTU2-210ENST00000567949 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
CTU2-210ENST00000567949 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
CTU2-210ENST00000567949 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
CTU2-210ENST00000567949 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
CTU2-210ENST00000567949 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
CTU2-210ENST00000567949 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
CTU2-210ENST00000567949 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
CTU2-210ENST00000567949 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
CTU2-210ENST00000567949 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
CTU2-210ENST00000567949 MT3P25713 68 aa5.56□□□□□ -1.52
CTU2-210ENST00000567949 MT4P47944 62 aa5.53□□□□□ -1.52
CTU2-210ENST00000567949 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
CTU2-210ENST00000567949 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
CTU2-210ENST00000567949 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
CTU2-210ENST00000567949 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
CTU2-210ENST00000567949 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.54
CTU2-210ENST00000567949 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
CTU2-210ENST00000567949 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
CTU2-210ENST00000567949 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
CTU2-210ENST00000567949 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CTU2-210ENST00000567949 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
CTU2-210ENST00000567949 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
CTU2-210ENST00000567949 PRM1P04553 51 aa4.84□□□□□ -1.64
CTU2-210ENST00000567949 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CTU2-210ENST00000567949 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
CTU2-210ENST00000567949 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
CTU2-210ENST00000567949 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
CTU2-210ENST00000567949 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
CTU2-210ENST00000567949 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
CTU2-210ENST00000567949 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
CTU2-210ENST00000567949 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
CTU2-210ENST00000567949 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
CTU2-210ENST00000567949 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
CTU2-210ENST00000567949 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
CTU2-210ENST00000567949 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
CTU2-210ENST00000567949 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
CTU2-210ENST00000567949 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
CTU2-210ENST00000567949 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
CTU2-210ENST00000567949 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
CTU2-210ENST00000567949 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
CTU2-210ENST00000567949 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
CTU2-210ENST00000567949 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CTU2-210ENST00000567949 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
CTU2-210ENST00000567949 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
CTU2-210ENST00000567949 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CTU2-210ENST00000567949 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 146.3 ms