RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
KARS-207ENST00000566560 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
KARS-207ENST00000566560 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
KARS-207ENST00000566560 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
KARS-207ENST00000566560 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
KARS-207ENST00000566560 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
KARS-207ENST00000566560 KMT2DO14686 5537 aa4.48□□□□□ -1.69
KARS-207ENST00000566560 TNP1P09430 55 aa4.45□□□□□ -1.7
KARS-207ENST00000566560 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
KARS-207ENST00000566560 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
KARS-207ENST00000566560 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
KARS-207ENST00000566560 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
KARS-207ENST00000566560 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
KARS-207ENST00000566560 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
KARS-207ENST00000566560 NEBP20929 6669 aa4.35□□□□□ -1.71
KARS-207ENST00000566560 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
KARS-207ENST00000566560 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
KARS-207ENST00000566560 ROMO1P60602 79 aa4.32□□□□□ -1.72
KARS-207ENST00000566560 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
KARS-207ENST00000566560 SPRR2EP22531 72 aa4.28□□□□□ -1.72
KARS-207ENST00000566560 SPRR2BP35325 72 aa4.28□□□□□ -1.72
KARS-207ENST00000566560 SPRR2AP35326 72 aa4.28□□□□□ -1.72
KARS-207ENST00000566560 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
KARS-207ENST00000566560 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
KARS-207ENST00000566560 MT1EP04732 61 aa4.24□□□□□ -1.73
KARS-207ENST00000566560 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
KARS-207ENST00000566560 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
KARS-207ENST00000566560 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
KARS-207ENST00000566560 SPRR2DP22532 72 aa4.13□□□□□ -1.75
KARS-207ENST00000566560 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
KARS-207ENST00000566560 MT1LQ93083 61 aa4.1□□□□□ -1.75
KARS-207ENST00000566560 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
KARS-207ENST00000566560 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
KARS-207ENST00000566560 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
KARS-207ENST00000566560 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
KARS-207ENST00000566560 MT1GP13640 62 aa4.06□□□□□ -1.76
KARS-207ENST00000566560 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
KARS-207ENST00000566560 MT1MQ8N339 61 aa4.02□□□□□ -1.77
KARS-207ENST00000566560 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
KARS-207ENST00000566560 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
KARS-207ENST00000566560 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
KARS-207ENST00000566560 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
KARS-207ENST00000566560 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
KARS-207ENST00000566560 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
KARS-207ENST00000566560 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
KARS-207ENST00000566560 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
KARS-207ENST00000566560 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
KARS-207ENST00000566560 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
KARS-207ENST00000566560 MT4P47944 62 aa3.59□□□□□ -1.83
KARS-207ENST00000566560 MT1AP04731 61 aa3.5□□□□□ -1.85
KARS-207ENST00000566560 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
KARS-207ENST00000566560 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
KARS-207ENST00000566560 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
KARS-207ENST00000566560 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
KARS-207ENST00000566560 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
KARS-207ENST00000566560 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
KARS-207ENST00000566560 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
KARS-207ENST00000566560 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
KARS-207ENST00000566560 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
KARS-207ENST00000566560 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
KARS-207ENST00000566560 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
KARS-207ENST00000566560 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
KARS-207ENST00000566560 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
KARS-207ENST00000566560 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
KARS-207ENST00000566560 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
KARS-207ENST00000566560 LCE1CQ5T751 118 aa3□□□□□ -1.93
KARS-207ENST00000566560 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
KARS-207ENST00000566560 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
KARS-207ENST00000566560 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
KARS-207ENST00000566560 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
KARS-207ENST00000566560 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
KARS-207ENST00000566560 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
KARS-207ENST00000566560 INE1O15225 51 aa2.37□□□□□ -2.03
KARS-207ENST00000566560 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
KARS-207ENST00000566560 PRM1P04553 51 aa2.24□□□□□ -2.05
KARS-207ENST00000566560 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
KARS-207ENST00000566560 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
KARS-207ENST00000566560 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms