RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
SCAMP2-207ENST00000566480 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
SCAMP2-207ENST00000566480 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
SCAMP2-207ENST00000566480 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SCAMP2-207ENST00000566480 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
SCAMP2-207ENST00000566480 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
SCAMP2-207ENST00000566480 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
SCAMP2-207ENST00000566480 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
SCAMP2-207ENST00000566480 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.7
SCAMP2-207ENST00000566480 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
SCAMP2-207ENST00000566480 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
SCAMP2-207ENST00000566480 MT1EP04732 61 aa4.31□□□□□ -1.72
SCAMP2-207ENST00000566480 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
SCAMP2-207ENST00000566480 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
SCAMP2-207ENST00000566480 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
SCAMP2-207ENST00000566480 MT1LQ93083 61 aa4.28□□□□□ -1.72
SCAMP2-207ENST00000566480 NEBP20929 6669 aa4.24□□□□□ -1.73
SCAMP2-207ENST00000566480 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
SCAMP2-207ENST00000566480 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
SCAMP2-207ENST00000566480 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
SCAMP2-207ENST00000566480 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
SCAMP2-207ENST00000566480 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
SCAMP2-207ENST00000566480 MT3P25713 68 aa4.14□□□□□ -1.75
SCAMP2-207ENST00000566480 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
SCAMP2-207ENST00000566480 SPRR2EP22531 72 aa4.07□□□□□ -1.76
SCAMP2-207ENST00000566480 SPRR2BP35325 72 aa4.07□□□□□ -1.76
SCAMP2-207ENST00000566480 SPRR2AP35326 72 aa4.07□□□□□ -1.76
SCAMP2-207ENST00000566480 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
SCAMP2-207ENST00000566480 MT1GP13640 62 aa4.04□□□□□ -1.76
SCAMP2-207ENST00000566480 MT1MQ8N339 61 aa4.04□□□□□ -1.76
SCAMP2-207ENST00000566480 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
SCAMP2-207ENST00000566480 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
SCAMP2-207ENST00000566480 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
SCAMP2-207ENST00000566480 SPRR2DP22532 72 aa3.92□□□□□ -1.78
SCAMP2-207ENST00000566480 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
SCAMP2-207ENST00000566480 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SCAMP2-207ENST00000566480 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
SCAMP2-207ENST00000566480 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
SCAMP2-207ENST00000566480 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
SCAMP2-207ENST00000566480 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
SCAMP2-207ENST00000566480 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
SCAMP2-207ENST00000566480 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
SCAMP2-207ENST00000566480 MT1AP04731 61 aa3.57□□□□□ -1.84
SCAMP2-207ENST00000566480 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
SCAMP2-207ENST00000566480 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SCAMP2-207ENST00000566480 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
SCAMP2-207ENST00000566480 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
SCAMP2-207ENST00000566480 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
SCAMP2-207ENST00000566480 MT4P47944 62 aa3.5□□□□□ -1.85
SCAMP2-207ENST00000566480 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
SCAMP2-207ENST00000566480 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
SCAMP2-207ENST00000566480 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
SCAMP2-207ENST00000566480 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
SCAMP2-207ENST00000566480 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SCAMP2-207ENST00000566480 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
SCAMP2-207ENST00000566480 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
SCAMP2-207ENST00000566480 PRM1P04553 51 aa3.17□□□□□ -1.9
SCAMP2-207ENST00000566480 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
SCAMP2-207ENST00000566480 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
SCAMP2-207ENST00000566480 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
SCAMP2-207ENST00000566480 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
SCAMP2-207ENST00000566480 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
SCAMP2-207ENST00000566480 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SCAMP2-207ENST00000566480 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
SCAMP2-207ENST00000566480 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
SCAMP2-207ENST00000566480 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SCAMP2-207ENST00000566480 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
SCAMP2-207ENST00000566480 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
SCAMP2-207ENST00000566480 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SCAMP2-207ENST00000566480 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SCAMP2-207ENST00000566480 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SCAMP2-207ENST00000566480 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
SCAMP2-207ENST00000566480 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
SCAMP2-207ENST00000566480 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
SCAMP2-207ENST00000566480 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
SCAMP2-207ENST00000566480 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SCAMP2-207ENST00000566480 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SCAMP2-207ENST00000566480 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 120 ms