RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
IFT140-206ENST00000565298 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
IFT140-206ENST00000565298 TNXBP22105 4242 aa6.23□□□□□ -1.41
IFT140-206ENST00000565298 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
IFT140-206ENST00000565298 LCE3DQ9BYE3 92 aa6.16□□□□□ -1.42
IFT140-206ENST00000565298 MT1MQ8N339 61 aa6.15□□□□□ -1.42
IFT140-206ENST00000565298 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
IFT140-206ENST00000565298 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
IFT140-206ENST00000565298 LCE3EQ5T5B0 92 aa6.06□□□□□ -1.44
IFT140-206ENST00000565298 MT3P25713 68 aa5.98□□□□□ -1.45
IFT140-206ENST00000565298 MUC2Q02817 5179 aa5.97□□□□□ -1.45
IFT140-206ENST00000565298 MT4P47944 62 aa5.94□□□□□ -1.46
IFT140-206ENST00000565298 KRTAP19-7Q3SYF9 63 aa5.92□□□□□ -1.46
IFT140-206ENST00000565298 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
IFT140-206ENST00000565298 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
IFT140-206ENST00000565298 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
IFT140-206ENST00000565298 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
IFT140-206ENST00000565298 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
IFT140-206ENST00000565298 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
IFT140-206ENST00000565298 MT1AP04731 61 aa5.72□□□□□ -1.49
IFT140-206ENST00000565298 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
IFT140-206ENST00000565298 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
IFT140-206ENST00000565298 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
IFT140-206ENST00000565298 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
IFT140-206ENST00000565298 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
IFT140-206ENST00000565298 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
IFT140-206ENST00000565298 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
IFT140-206ENST00000565298 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
IFT140-206ENST00000565298 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
IFT140-206ENST00000565298 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
IFT140-206ENST00000565298 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
IFT140-206ENST00000565298 PRM1P04553 51 aa5.33□□□□□ -1.56
IFT140-206ENST00000565298 USH2AO75445 5202 aa5.31□□□□□ -1.56
IFT140-206ENST00000565298 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
IFT140-206ENST00000565298 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
IFT140-206ENST00000565298 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
IFT140-206ENST00000565298 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
IFT140-206ENST00000565298 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
IFT140-206ENST00000565298 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
IFT140-206ENST00000565298 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
IFT140-206ENST00000565298 KMT2DO14686 5537 aa5.13□□□□□ -1.59
IFT140-206ENST00000565298 MACF1Q9UPN3 7388 aaKnown RBP5.12□□□□□ -1.59
IFT140-206ENST00000565298 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
IFT140-206ENST00000565298 NEBP20929 6669 aa4.91□□□□□ -1.62
IFT140-206ENST00000565298 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
IFT140-206ENST00000565298 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
IFT140-206ENST00000565298 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
IFT140-206ENST00000565298 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
IFT140-206ENST00000565298 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
IFT140-206ENST00000565298 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
IFT140-206ENST00000565298 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
IFT140-206ENST00000565298 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
IFT140-206ENST00000565298 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
IFT140-206ENST00000565298 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
IFT140-206ENST00000565298 MUC19Q7Z5P9 8384 aa4.52□□□□□ -1.69
IFT140-206ENST00000565298 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
IFT140-206ENST00000565298 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
IFT140-206ENST00000565298 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
IFT140-206ENST00000565298 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
IFT140-206ENST00000565298 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
IFT140-206ENST00000565298 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
IFT140-206ENST00000565298 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
IFT140-206ENST00000565298 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
IFT140-206ENST00000565298 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
IFT140-206ENST00000565298 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
IFT140-206ENST00000565298 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
IFT140-206ENST00000565298 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
IFT140-206ENST00000565298 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
IFT140-206ENST00000565298 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
IFT140-206ENST00000565298 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
IFT140-206ENST00000565298 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
IFT140-206ENST00000565298 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
IFT140-206ENST00000565298 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
IFT140-206ENST00000565298 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
IFT140-206ENST00000565298 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
IFT140-206ENST00000565298 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
IFT140-206ENST00000565298 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
IFT140-206ENST00000565298 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 164.3 ms